| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443176
Identifier: 126443176
GI number: 126443176
Start: 1131655
End: 1133037
Strand: Reverse
Name: 126443176
Synonym: BURPS668_A1195
Alternate gene names: NA
Gene position: 1133037-1131655 (Counterclockwise)
Preceding gene: 126443063
Following gene: 126442468
Centisome position: 36.23
GC content: 65.58
Gene sequence:
>1383_bases TTGGCGATTCATCATCGCCCGTCGATTTCCGGCGATATATCGAAACAGCATTCAATCGATCAAGCGACCATGTTCGAATC GTTCAACAAGGACGTCATCGATGCGTTTGCCAGAAACAAACGCAGGCTGACGAAAAACGCGGCGAGCCGCCAGGTGCGGG CGCTGCTGGACGAAGTCGGCGCGTCGGCGTTCAAGCTGCTGCCCCATCCGTTTCTCTTTCCCGCCGACGAGTTCGAGATG CTGGCCCGGCGCGCGCGCGCGTTGCTGCGCGCGCAGAACAAAATCGTGCGGCATCTGTGCCGGCACCGCCCGCGGGCGGA CCTGCTCGCGCAGTGCTCGCTGAACCCGGCGCTCGCGCGCTATGTCGACTGGGACGAACTCGAGGCGGGCCGCCGCCGGG TGGCCCGCGTCGACATCCTGCCGTTACCGGACGGCTATGCGGTGTGCGAGCTGAATTTCTCGGCCGCGGTGGGCGGCGCC GAGCTGTTCGACTGCCATCGCCGGTTCATGCAGGCATCGGGTTGGCCCGCCTTCGAGCGCGGCGGCTCGCCGTATGCGAA CCTGCGCGCGCTCTACGAGGACACGCTCCGATCGATGGAAATCGACCGGATCGTGCTGCTCGACTGGAGCTCGCACGCCG CCCGCGGCTATGCGACGCCCGAGCTCGCGCGTCGATATCTCGCGGGCATCGCGAACGGCATGCCGGTCGACGTCCACACC GAATTGACCTACCCGTCGAAGTGGCTGGGCAACGGCCGAGGCAAGGGCATCCTGATCCACCGGAATTTCGTCTACGACGA CGTGACGGTGAACGCCGATCGCTTCGACGCCATTCACCGCAGCGGCGCGACGTTTTCGAACGGACTGGAAGCCGAGCTGC TGATGAGCAAGGCATGGCTTGCGCTGCTGTGCGACGCGCGCTTTCATCCGCTCCTCGACGAAGACGAGATCGCGGCGATC CGGAACCATGTGCCGCACACGTTTCGCCTCGACGAGGGCACGTTCGCCGAGGCGCTGGCTCACAAGGACGAATGGGTGTT CAAGCTGAACGTGTCCTACGGCGGCGTCGACGTGCTGATCGGCAAGGATCATCCGGCCGACGCGCTGGCCGATCGGCTGC GCCGACAGGGCATCGCCAACTGGATTTGCCAGGCGTTCCGCGCGGTGCAGACGATTCGCCACCCTTTCGACGACACCTTC GTCGCCGCCGAGCACAAGCCCGTGCTGGGAATGTATCTGCACCGCGACGACGCGAGCGGCATGGCGCTGCGCTCGAACCG CTTTTCGAGCGTGGTGAATGCGGGCAGCGGGGCCGGCGTTCACTGGGCAGCCGTCGTCACCGAAGCGGAAAAAGCGGCGC TACTCGCCGCGATGGACGGCTGA
Upstream 100 bases:
>100_bases CGTTTCGCCCCGCATCGAAGCCGCGCACGAATCGTAAAAAATATGGCAGCATGGCGACACGCCGCCGCCCCGACATAAGA CAACTCGACTGCCTTGATTA
Downstream 100 bases:
>100_bases GGTCCGGCCACGCGCGCCGTCCCGCGCATGCGCCGCGCGGCGACGCGCTGCCTAGGATATCGAAGCGTTCTTGGCGTATC GGATTTCAGGCGAAACAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MAIHHRPSISGDISKQHSIDQATMFESFNKDVIDAFARNKRRLTKNAASRQVRALLDEVGASAFKLLPHPFLFPADEFEM LARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALARYVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGA ELFDCHRRFMQASGWPAFERGGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHT ELTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWLALLCDARFHPLLDEDEIAAI RNHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLIGKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTF VAAEHKPVLGMYLHRDDASGMALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG
Sequences:
>Translated_460_residues MAIHHRPSISGDISKQHSIDQATMFESFNKDVIDAFARNKRRLTKNAASRQVRALLDEVGASAFKLLPHPFLFPADEFEM LARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALARYVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGA ELFDCHRRFMQASGWPAFERGGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHT ELTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWLALLCDARFHPLLDEDEIAAI RNHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLIGKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTF VAAEHKPVLGMYLHRDDASGMALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG >Mature_459_residues AIHHRPSISGDISKQHSIDQATMFESFNKDVIDAFARNKRRLTKNAASRQVRALLDEVGASAFKLLPHPFLFPADEFEML ARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALARYVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGAE LFDCHRRFMQASGWPAFERGGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHTE LTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWLALLCDARFHPLLDEDEIAAIR NHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLIGKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTFV AAEHKPVLGMYLHRDDASGMALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51322; Mature: 51191
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHHRPSISGDISKQHSIDQATMFESFNKDVIDAFARNKRRLTKNAASRQVRALLDEVG CCCCCCCCCCCCCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASAFKLLPHPFLFPADEFEMLARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALAR CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHH YVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGAELFDCHRRFMQASGWPAFER HCCHHHHHHHHHHEEEEEEEECCCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCHHC GGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHT CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE ELTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWL CCCCCHHHCCCCCCCEEEEEECEEECCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ALLCDARFHPLLDEDEIAAIRNHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLI HHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHCCCCEEEEEEECCCCEEEEE GKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTFVAAEHKPVLGMYLHRDDASG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCC MALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG CEEHHHHHHHHHCCCCCCCEEEHHHHHHHHHHEEEEECCC >Mature Secondary Structure AIHHRPSISGDISKQHSIDQATMFESFNKDVIDAFARNKRRLTKNAASRQVRALLDEVG CCCCCCCCCCCCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASAFKLLPHPFLFPADEFEMLARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALAR CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHH YVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGAELFDCHRRFMQASGWPAFER HCCHHHHHHHHHHEEEEEEEECCCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCHHC GGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHT CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE ELTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWL CCCCCHHHCCCCCCCEEEEEECEEECCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ALLCDARFHPLLDEDEIAAIRNHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLI HHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHCCCCEEEEEEECCCCEEEEE GKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTFVAAEHKPVLGMYLHRDDASG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCC MALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG CEEHHHHHHHHHCCCCCCCEEEHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA