Click here to switch to the map view.

The map label for this gene is 126442914

Identifier: 126442914

GI number: 126442914

Start: 1256419

End: 1256880

Strand: Reverse

Name: 126442914

Synonym: BURPS668_A1334

Alternate gene names: NA

Gene position: 1256880-1256419 (Counterclockwise)

Preceding gene: 126443814

Following gene: 126443925

Centisome position: 40.19

GC content: 65.8

Gene sequence:

>462_bases
ATGCCACGCGATAATCGCCTGTCCCGCATGCTCCATGTGCTGATCCATATGGATCGGCACGTCGAGCGCGCCACCTCCGA
GGCGATCGCGAAGATGCTCGGAACGAACCCCGTCGTCGTGCGCCGGATGATGGCCGGGCTGCGGGACCAAGGCTACGTCC
GATCGGAAAAAGGCCATGGCGGCGGCTGGGAACTCGTCTGCGATCTGGATGCGATCACGCTGCTTGATGTCTACCGGGCC
ATCGGCGAACCGCCGCTGTTCAGCATCGGCCCCCATGCCGAGCAGTCCGACTGCCTCGTCGAGAAGGCCGTCGATGCCCG
CATGACAGAAGCGCTGGGCGAAGCGCAGGCCTTGCTGCTCGCGCGTTTCGGCGCCATCACAGTGGGCGATCTGGCGAGGG
ACTTCGACAAGCGGCTCGCCCGCCACAAGGCGGGGAAACGGGGGAATTGCGCCGCGGCATAG

Upstream 100 bases:

>100_bases
AAGTTACGAGAGAACGCGACGTTTGTCAAATCAAAGCACTTGCATTGTTACGTGTGCGACGCAGTGGTAGATTGCGGTGT
GATTCGGAAAGGACCCCACG

Downstream 100 bases:

>100_bases
CGCGCTCGCGCGGCGGATTTCGGGCAACCGGCCGGCCGAATGAATCGTCGCGCGTCAGCCGGTGCCGGCGATGGTCGGCG
CCGCGCCGAACATCGCCGGC

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Rrf2 Family Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator Family; Transcriptional Regulator Badm/Rrf2 Family; Transcriptional Regulator Superfamily; HTH Domain-Containing; HTH-Type Transcriptional Regulator YwnA; Rf2 Family Transcriptional Regulator; Transcriptional Regulator Family Protein; Transcriptional Regulator Rrf2 Family

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPRDNRLSRMLHVLIHMDRHVERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHGGGWELVCDLDAITLLDVYRA
IGEPPLFSIGPHAEQSDCLVEKAVDARMTEALGEAQALLLARFGAITVGDLARDFDKRLARHKAGKRGNCAAA

Sequences:

>Translated_153_residues
MPRDNRLSRMLHVLIHMDRHVERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHGGGWELVCDLDAITLLDVYRA
IGEPPLFSIGPHAEQSDCLVEKAVDARMTEALGEAQALLLARFGAITVGDLARDFDKRLARHKAGKRGNCAAA
>Mature_152_residues
PRDNRLSRMLHVLIHMDRHVERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHGGGWELVCDLDAITLLDVYRAI
GEPPLFSIGPHAEQSDCLVEKAVDARMTEALGEAQALLLARFGAITVGDLARDFDKRLARHKAGKRGNCAAA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16786; Mature: 16654

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDNRLSRMLHVLIHMDRHVERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCCCCC
GGWELVCDLDAITLLDVYRAIGEPPLFSIGPHAEQSDCLVEKAVDARMTEALGEAQALLL
CCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARFGAITVGDLARDFDKRLARHKAGKRGNCAAA
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PRDNRLSRMLHVLIHMDRHVERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCCCCC
GGWELVCDLDAITLLDVYRAIGEPPLFSIGPHAEQSDCLVEKAVDARMTEALGEAQALLL
CCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARFGAITVGDLARDFDKRLARHKAGKRGNCAAA
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA