| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126442878
Identifier: 126442878
GI number: 126442878
Start: 2026927
End: 2028732
Strand: Reverse
Name: 126442878
Synonym: BURPS668_A2088
Alternate gene names: NA
Gene position: 2028732-2026927 (Counterclockwise)
Preceding gene: 126443417
Following gene: 126442385
Centisome position: 64.87
GC content: 70.21
Gene sequence:
>1806_bases ATGTCCGTCAGCGTGCGCAGCTATCTTTCCCCGACGTTGGTCCTGCTGGCCTTCGACTGGCCCGACGCGCAGCGGCGCGA CGATTTTCTCGGCTTCGCGATCAAGCGCACGCCGGGCTTCTGGTCGGCGGACGGCAAGACCCGCGCCGCGACGAGCTGGC TGCCGAACCGGTTGACCTTCGACGGCCCCGCGGCCCACACGCAAGGCGATGCGCCGACCGATCAGGCGCCGATCCAGAAA TTCATGTGGTGGGACGCGCGGATCGATCCGCCCGATCGCGGCCGATCGTTTCGCTACGACGTCTATCCGGTCGTCGGCAC CCCCGCGTCGCTGCAGGTGCTCGAGGCCGAGGCAGGCGTCTGCGCGATCACGCTGCCCGCGCATGTCGAGGACGGCGTCG GCACGTGGTTCAACCGCGCGGTGGTGAGCTCGCAGGCGTTCGCGAAGCAGGTTCGCGCGCTGCATCTCGCGGACGGCGGC GCGCCGTCGCCCGATGCGGCGCTGCGGTTGCGCACGTGGCTCGCGAACGATCTGCAGGAAACCTTCGGGCTGATGCTCGG CGCCGACGCGCGGCGCGCGGTATCGGCCGTCTATCACCTGACCGATCCGCTGTGGGCGATTCCCGCGTTCGACGCGTTCG GCCGCGCGCACGGCGCCAACGCGCTCGCGATCGTCTACGATGCGCACGAGACGAAGCGCGGCTCGGGCGAGCCGCCGCTG CCGTCGCCGAACCAGCCGGCAGTCGAGCGATTGACGGGCGTCGCGACGCTCGCGCCGCGCGACAAGACGCGAATCATGCA CGACAAGTTCATCGTCGCGGGCGACGAGACGGGGCCCGCGCGTGTGCTGACCGGCTCGGCGAACTTCACGGCGGAGGGCA TCGCGGAGCAGGCGAACGTGCTGCACACGTTCGAATCGGCGGCGCTCGCCGAGCTGTACAACGCGCGTGCGCGCGCGCTC GCCTCGAACCCGGGCATCGCCGAGACCGCGCGTCTCGCTCCAGGCTGGTCGGAGCCGGTCGAAATCGGCTCGGCGCGCGT GCGCGTATCGTTTTCACCCGAGCCGCGCGGCGTGCGCACGCAGATCGACACGATCGTCGAAGCGGTTCGCGGCGCGCAGC ATTCGGTCGCGTTCTGCCTGTTCATGCCGACCGACGCCGCGCTGCGCGATGCATGCTTCGCGGCGGGCGAGCGCGGGCTC ATGATGTTCGGGCTCGTCAACGCGATCAGCGCGCGCGGCGCGCAGCAGGCGGATGCGGACCGGCGCGACGGCAAGACGCT CGACGCCGCGCGTCTCGCGAACCTCGAGCTGTATCACCGCAGCCGATCGAATCGCGACGTGATCGACGCCGCGTACTTCT CGCCCGCGACGGTGCCCGACGGCTTCGAGACGGAGCTGCGGCTCTTTCCGGGCGAGCCGGCGCCGGCGTATCCGCCCGTC GTGGTGCACCACAAGTTCGTCGTGATCGACGCGGAAGGCGCGAATCCGATCGTCTACAGCGGCTCGGCGAACATGAGCGC GAACTCCGAGCACTACAACGACGAGAATCTGCTCGAGATACGCGACGCGCGCATCGCGGGGATCTACCTCGCCGAATTCC TGCGGCTTTACGAGCACTATCGTGCGCGCGCGCTGGCGATCGCCTCGCGTCGCGGCGATGGCGGCGGTTCAACGGCGGGG AACGCGGACGCGCACGGTGGCCTGGCGCTGCAGCCCGATTCGCGGTGGGCGAAAAAGTACTTCGTCGCCGGAAGCCCGGA GGAGAAGGCGCGGATCGCGCTTGCGGCGCCGGTGGCGGCGCGCTGA
Upstream 100 bases:
>100_bases CGCGACACGGAAACTTCATCGGAGCGTCACACGCACGGCAAGCGCGTGTTGAACACTCGTCGCTTCGACTTTGTCAGGCG ATGAGCCGAGGAGGGCGGCG
Downstream 100 bases:
>100_bases CGGGCGGGGCGCTCGCCGCCGTTTGGGGGGGGCCGGCGCGTCGGCGTGGCGCGCCGCAGACCGATCGGATTGCGGGGGCC GCCCGGTGGCGCGCGAGCGC
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: Nuclease; Phospholipase D Domain Protein
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MSVSVRSYLSPTLVLLAFDWPDAQRRDDFLGFAIKRTPGFWSADGKTRAATSWLPNRLTFDGPAAHTQGDAPTDQAPIQK FMWWDARIDPPDRGRSFRYDVYPVVGTPASLQVLEAEAGVCAITLPAHVEDGVGTWFNRAVVSSQAFAKQVRALHLADGG APSPDAALRLRTWLANDLQETFGLMLGADARRAVSAVYHLTDPLWAIPAFDAFGRAHGANALAIVYDAHETKRGSGEPPL PSPNQPAVERLTGVATLAPRDKTRIMHDKFIVAGDETGPARVLTGSANFTAEGIAEQANVLHTFESAALAELYNARARAL ASNPGIAETARLAPGWSEPVEIGSARVRVSFSPEPRGVRTQIDTIVEAVRGAQHSVAFCLFMPTDAALRDACFAAGERGL MMFGLVNAISARGAQQADADRRDGKTLDAARLANLELYHRSRSNRDVIDAAYFSPATVPDGFETELRLFPGEPAPAYPPV VVHHKFVVIDAEGANPIVYSGSANMSANSEHYNDENLLEIRDARIAGIYLAEFLRLYEHYRARALAIASRRGDGGGSTAG NADAHGGLALQPDSRWAKKYFVAGSPEEKARIALAAPVAAR
Sequences:
>Translated_601_residues MSVSVRSYLSPTLVLLAFDWPDAQRRDDFLGFAIKRTPGFWSADGKTRAATSWLPNRLTFDGPAAHTQGDAPTDQAPIQK FMWWDARIDPPDRGRSFRYDVYPVVGTPASLQVLEAEAGVCAITLPAHVEDGVGTWFNRAVVSSQAFAKQVRALHLADGG APSPDAALRLRTWLANDLQETFGLMLGADARRAVSAVYHLTDPLWAIPAFDAFGRAHGANALAIVYDAHETKRGSGEPPL PSPNQPAVERLTGVATLAPRDKTRIMHDKFIVAGDETGPARVLTGSANFTAEGIAEQANVLHTFESAALAELYNARARAL ASNPGIAETARLAPGWSEPVEIGSARVRVSFSPEPRGVRTQIDTIVEAVRGAQHSVAFCLFMPTDAALRDACFAAGERGL MMFGLVNAISARGAQQADADRRDGKTLDAARLANLELYHRSRSNRDVIDAAYFSPATVPDGFETELRLFPGEPAPAYPPV VVHHKFVVIDAEGANPIVYSGSANMSANSEHYNDENLLEIRDARIAGIYLAEFLRLYEHYRARALAIASRRGDGGGSTAG NADAHGGLALQPDSRWAKKYFVAGSPEEKARIALAAPVAAR >Mature_600_residues SVSVRSYLSPTLVLLAFDWPDAQRRDDFLGFAIKRTPGFWSADGKTRAATSWLPNRLTFDGPAAHTQGDAPTDQAPIQKF MWWDARIDPPDRGRSFRYDVYPVVGTPASLQVLEAEAGVCAITLPAHVEDGVGTWFNRAVVSSQAFAKQVRALHLADGGA PSPDAALRLRTWLANDLQETFGLMLGADARRAVSAVYHLTDPLWAIPAFDAFGRAHGANALAIVYDAHETKRGSGEPPLP SPNQPAVERLTGVATLAPRDKTRIMHDKFIVAGDETGPARVLTGSANFTAEGIAEQANVLHTFESAALAELYNARARALA SNPGIAETARLAPGWSEPVEIGSARVRVSFSPEPRGVRTQIDTIVEAVRGAQHSVAFCLFMPTDAALRDACFAAGERGLM MFGLVNAISARGAQQADADRRDGKTLDAARLANLELYHRSRSNRDVIDAAYFSPATVPDGFETELRLFPGEPAPAYPPVV VHHKFVVIDAEGANPIVYSGSANMSANSEHYNDENLLEIRDARIAGIYLAEFLRLYEHYRARALAIASRRGDGGGSTAGN ADAHGGLALQPDSRWAKKYFVAGSPEEKARIALAAPVAAR
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64737; Mature: 64606
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSVRSYLSPTLVLLAFDWPDAQRRDDFLGFAIKRTPGFWSADGKTRAATSWLPNRLTF CCCCHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEC DGPAAHTQGDAPTDQAPIQKFMWWDARIDPPDRGRSFRYDVYPVVGTPASLQVLEAEAGV CCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCE CAITLPAHVEDGVGTWFNRAVVSSQAFAKQVRALHLADGGAPSPDAALRLRTWLANDLQE EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHH TFGLMLGADARRAVSAVYHLTDPLWAIPAFDAFGRAHGANALAIVYDAHETKRGSGEPPL HHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC PSPNQPAVERLTGVATLAPRDKTRIMHDKFIVAGDETGPARVLTGSANFTAEGIAEQANV CCCCCHHHHHHHHHEEECCCCCCEEEECEEEEECCCCCCCEEEECCCCCCHHHHHHHHHH LHTFESAALAELYNARARALASNPGIAETARLAPGWSEPVEIGSARVRVSFSPEPRGVRT HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHCCCEEEEEEECCCCCCHHH QIDTIVEAVRGAQHSVAFCLFMPTDAALRDACFAAGERGLMMFGLVNAISARGAQQADAD HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCC RRDGKTLDAARLANLELYHRSRSNRDVIDAAYFSPATVPDGFETELRLFPGEPAPAYPPV CCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCE VVHHKFVVIDAEGANPIVYSGSANMSANSEHYNDENLLEIRDARIAGIYLAEFLRLYEHY EEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH RARALAIASRRGDGGGSTAGNADAHGGLALQPDSRWAKKYFVAGSPEEKARIALAAPVAA HHHHEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHEEEECCCCCCCCEEEEECCCCC R C >Mature Secondary Structure SVSVRSYLSPTLVLLAFDWPDAQRRDDFLGFAIKRTPGFWSADGKTRAATSWLPNRLTF CCCHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEC DGPAAHTQGDAPTDQAPIQKFMWWDARIDPPDRGRSFRYDVYPVVGTPASLQVLEAEAGV CCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCE CAITLPAHVEDGVGTWFNRAVVSSQAFAKQVRALHLADGGAPSPDAALRLRTWLANDLQE EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHH TFGLMLGADARRAVSAVYHLTDPLWAIPAFDAFGRAHGANALAIVYDAHETKRGSGEPPL HHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC PSPNQPAVERLTGVATLAPRDKTRIMHDKFIVAGDETGPARVLTGSANFTAEGIAEQANV CCCCCHHHHHHHHHEEECCCCCCEEEECEEEEECCCCCCCEEEECCCCCCHHHHHHHHHH LHTFESAALAELYNARARALASNPGIAETARLAPGWSEPVEIGSARVRVSFSPEPRGVRT HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHCCCEEEEEEECCCCCCHHH QIDTIVEAVRGAQHSVAFCLFMPTDAALRDACFAAGERGLMMFGLVNAISARGAQQADAD HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCC RRDGKTLDAARLANLELYHRSRSNRDVIDAAYFSPATVPDGFETELRLFPGEPAPAYPPV CCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCE VVHHKFVVIDAEGANPIVYSGSANMSANSEHYNDENLLEIRDARIAGIYLAEFLRLYEHY EEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH RARALAIASRRGDGGGSTAGNADAHGGLALQPDSRWAKKYFVAGSPEEKARIALAAPVAA HHHHEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHEEEECCCCCCCCEEEEECCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA