| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126442784
Identifier: 126442784
GI number: 126442784
Start: 1364410
End: 1366134
Strand: Reverse
Name: 126442784
Synonym: BURPS668_A1465
Alternate gene names: NA
Gene position: 1366134-1364410 (Counterclockwise)
Preceding gene: 126443682
Following gene: 126443689
Centisome position: 43.68
GC content: 67.3
Gene sequence:
>1725_bases TTGACGCTCGGCCGGAAACACGCTGTAGGCATGGGAAGCAGGAACATGGGCGACTATCTGGCGCAGGACGCGCGTATCGA GCGGATCACGGTTCGCGATCCCGAGGCGCGGACATGGTTCGATCGCGGTCTGCTGTGGGCATACGGATTCAATTTCGAAG CCGCGGTCGATTGCTTTCAGGAAGCGGCGCGGATCGATCCGGATTGCGTGCTCGCCTACTGGGGCATCGCGTACGCGTCG GGCTGCAATTACAACAAGCAGTGGAAGGTGTTTCATCCGCGGATGATCGCGCGCTGCATGAAGCTCGCGCGCGACGCGAT CCGGCGCGCGCAGGCGTGCCGGGCGGGCGCGAGCGCGCTGGAGATGGCGCTCGTGCGCGCGATCGAGTGCCGCTTCCAGG CCGAGGGCGCCCATGACGAAGCGCTGCTGCGGCGCTGGAACGACGACTACGCCCGCGCGATGCGCGACGTCTATCTGTCC TGCCCCGACAATCTCGATGTCGCCGCGCTGTTCGCGGACGCGCTGATCAATCGCACGCCGTGGAAGCTCTGGGACATGTC GAGCGGCAAGACCGCCGACGGCGCCGATACCGACGAGGCGATCGCGGTTCTCGAGCGCGCGCTCGCGCAGGTCGACGCGA ACGGCCTCGCCCCGCATCCGGGGCTGCTGCACGTCTACATCCACACGATCGAAATGTCGCCGACGCCGGAGAAGGCGCTT CGCGCGGCCGACGCACTGCGCGATCTCGCGCCCGACGTCGGCCATCTGCTGCACATGGCCTCGCACATCGACATTCTTTG CGGCCACTACCACGACGCGATCGTCGCGAACGACCGCGCAATCGCCGCCAACCAGCGTGTGCTCGACCGCCATCCGCAGT GGCTCGAATTCCGGCTGTACTGCGTGCACGACATCCATTTCAAGATCTATGCGGCGATGATGCTCGGCCGTTTCTCGGCG GCGTGGCAAGGGGTGCACGAGCTCGAGGCGCTGATCACGGAAGCGCTGCTGCGCGTCGAGCAGCCGCCGATGGCCTACCT CCTCGAAGGCTTCCTGTCGGTGCGCGTGCACGTGCTGATCCGGTTCGGCAAATGGCGCGAGATCCTCGAGCAGCCGTTCC CCGCGAACGCCGCGCTGTACTGCAACACGACCGCGATGCTCCATTACGCGCGCGGCATCGCCTACGCGAACCTGAAGCTC GCCGGCCCCGCCGCGCAGGCGCGCCGCGCGTTCTCGATCGCGCAGGCGGCCCTTCACGAGCATCGGTATGTGACGAACAA CACCTGCGCGGATCTGCTGAAGATCGCCGCTTGCGTGCTCGACGGCGAGATCGCGTATCACGAGGACCGGTTCGACGAAG CGTTCGCGCATCTGCGGCGCGCGGTCGAACTCGACGACGGGCTCGAATACATGGAGCCGTGGGGCTGGATGATGCCGACG CGCCACCCGCTCGGCGCGCTGCTGCTCGCGCAAGGGCATGTCGAGGAAGCCGAGCGCGTCTATCGCGCCGATCTCGGGCT CGATTCGACGATCTACCGCTCGCTCCAGCATCCGGGCAACGTGTGGAGCCTGCAGGGCTACGTGAGCTGCCTGCGCAGGC TCGGCAAGCACGAAACGGCGGACGCGCTGCAACCGGCGCTCGACGTCGCGCGCGCGCGGGCCGACGTCGAGATCGGCGTG TCGTGCTTCTGCGCGGCGCCCAGCAAGCGCGGTTGCTGCCACTGA
Upstream 100 bases:
>100_bases TCGACTGGGTGCGTTCGACCTGCGGGTCGGACATCCGGCGCGCCCTGAAATTGAGCATCGGATTCGGCGGCATCAACACC GCGCTCTGTCTCGAGCGCTG
Downstream 100 bases:
>100_bases CGCCGCGAGATCGCCTCCGGCGCGCCGCCGCGCCCGCGCCGGGCGGGCGCGAGCCCCCCGAGCGCGCCGGGCCGCGTCGC GGCGGAACGCCGCCGCCTCA
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Region; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MTLGRKHAVGMGSRNMGDYLAQDARIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQEAARIDPDCVLAYWGIAYAS GCNYNKQWKVFHPRMIARCMKLARDAIRRAQACRAGASALEMALVRAIECRFQAEGAHDEALLRRWNDDYARAMRDVYLS CPDNLDVAALFADALINRTPWKLWDMSSGKTADGADTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKAL RAADALRDLAPDVGHLLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLYCVHDIHFKIYAAMMLGRFSA AWQGVHELEALITEALLRVEQPPMAYLLEGFLSVRVHVLIRFGKWREILEQPFPANAALYCNTTAMLHYARGIAYANLKL AGPAAQARRAFSIAQAALHEHRYVTNNTCADLLKIAACVLDGEIAYHEDRFDEAFAHLRRAVELDDGLEYMEPWGWMMPT RHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQHPGNVWSLQGYVSCLRRLGKHETADALQPALDVARARADVEIGV SCFCAAPSKRGCCH
Sequences:
>Translated_574_residues MTLGRKHAVGMGSRNMGDYLAQDARIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQEAARIDPDCVLAYWGIAYAS GCNYNKQWKVFHPRMIARCMKLARDAIRRAQACRAGASALEMALVRAIECRFQAEGAHDEALLRRWNDDYARAMRDVYLS CPDNLDVAALFADALINRTPWKLWDMSSGKTADGADTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKAL RAADALRDLAPDVGHLLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLYCVHDIHFKIYAAMMLGRFSA AWQGVHELEALITEALLRVEQPPMAYLLEGFLSVRVHVLIRFGKWREILEQPFPANAALYCNTTAMLHYARGIAYANLKL AGPAAQARRAFSIAQAALHEHRYVTNNTCADLLKIAACVLDGEIAYHEDRFDEAFAHLRRAVELDDGLEYMEPWGWMMPT RHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQHPGNVWSLQGYVSCLRRLGKHETADALQPALDVARARADVEIGV SCFCAAPSKRGCCH >Mature_573_residues TLGRKHAVGMGSRNMGDYLAQDARIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQEAARIDPDCVLAYWGIAYASG CNYNKQWKVFHPRMIARCMKLARDAIRRAQACRAGASALEMALVRAIECRFQAEGAHDEALLRRWNDDYARAMRDVYLSC PDNLDVAALFADALINRTPWKLWDMSSGKTADGADTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKALR AADALRDLAPDVGHLLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLYCVHDIHFKIYAAMMLGRFSAA WQGVHELEALITEALLRVEQPPMAYLLEGFLSVRVHVLIRFGKWREILEQPFPANAALYCNTTAMLHYARGIAYANLKLA GPAAQARRAFSIAQAALHEHRYVTNNTCADLLKIAACVLDGEIAYHEDRFDEAFAHLRRAVELDDGLEYMEPWGWMMPTR HPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQHPGNVWSLQGYVSCLRRLGKHETADALQPALDVARARADVEIGVS CFCAAPSKRGCCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64378; Mature: 64247
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGRKHAVGMGSRNMGDYLAQDARIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQ CCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHCCCEEEECCCHHHHHHHHH EAARIDPDCVLAYWGIAYASGCNYNKQWKVFHPRMIARCMKLARDAIRRAQACRAGASAL HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMALVRAIECRFQAEGAHDEALLRRWNDDYARAMRDVYLSCPDNLDVAALFADALINRTP HHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC WKLWDMSSGKTADGADTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKAL CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCHHHHH RAADALRDLAPDVGHLLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLY HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEECCCCHHHHCCCCEEEEEEE CVHDIHFKIYAAMMLGRFSAAWQGVHELEALITEALLRVEQPPMAYLLEGFLSVRVHVLI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RFGKWREILEQPFPANAALYCNTTAMLHYARGIAYANLKLAGPAAQARRAFSIAQAALHE HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHH HRYVTNNTCADLLKIAACVLDGEIAYHEDRFDEAFAHLRRAVELDDGLEYMEPWGWMMPT CCCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC RHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQHPGNVWSLQGYVSCLRRLGKHETA CCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCH DALQPALDVARARADVEIGVSCFCAAPSKRGCCH HHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCC >Mature Secondary Structure TLGRKHAVGMGSRNMGDYLAQDARIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQ CCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHCCCEEEECCCHHHHHHHHH EAARIDPDCVLAYWGIAYASGCNYNKQWKVFHPRMIARCMKLARDAIRRAQACRAGASAL HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMALVRAIECRFQAEGAHDEALLRRWNDDYARAMRDVYLSCPDNLDVAALFADALINRTP HHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC WKLWDMSSGKTADGADTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKAL CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCHHHHH RAADALRDLAPDVGHLLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLY HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEECCCCHHHHCCCCEEEEEEE CVHDIHFKIYAAMMLGRFSAAWQGVHELEALITEALLRVEQPPMAYLLEGFLSVRVHVLI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RFGKWREILEQPFPANAALYCNTTAMLHYARGIAYANLKLAGPAAQARRAFSIAQAALHE HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHH HRYVTNNTCADLLKIAACVLDGEIAYHEDRFDEAFAHLRRAVELDDGLEYMEPWGWMMPT CCCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC RHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQHPGNVWSLQGYVSCLRRLGKHETA CCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCH DALQPALDVARARADVEIGVSCFCAAPSKRGCCH HHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA