Click here to switch to the map view.

The map label for this gene is 126442750

Identifier: 126442750

GI number: 126442750

Start: 2203186

End: 2204169

Strand: Reverse

Name: 126442750

Synonym: BURPS668_A2274

Alternate gene names: NA

Gene position: 2204169-2203186 (Counterclockwise)

Preceding gene: 126443642

Following gene: 126443480

Centisome position: 70.48

GC content: 74.7

Gene sequence:

>984_bases
ATGAAGCTGCTGCGGATCCTGACCGGCCTGCACGCCGGCGTGGAAATCGCGCTCGACGCCGGCGAGCACCGGATCGGCGC
GGGCGATGACGCCGAGATTCGCATCACCGATTGGCGCGACGGCGATCTGCTGCTGTCGATCGACGCGCAGGGCGTGACGC
GCGCGCGGCGCGCGGCGGGCATGCCGCCCGAGACGGCGGCGGACCGGTTCGACGCGGACGGCTCGCCGCTGCTGATGCTC
GATTTCGTGCCGGTGCCGTTCGGCGAGACCGCGCTTTGCGTCGGGCCCGAGCAGGGCGCATGGCCGAGCGATCTCGAGCT
GCTCGCGACGCTGTGGGCGCCGCCGCCCGGCGCCGATGCGGCGCGGCGCGGCGCGCAGCGCAAGCTTGCCGCGTGCGCGG
CGGCGGGCGGCGCGCTCGTCGCCGGGCTGCTCGCGATGGGCGCGATGCTGGCGAGCGCGCACCCGAGCGCGCCGCCCGCG
GTCGAGACCGTCGATGCGCTCGCGAGCCGCCTGGGCGGCGAGCTCGAGCGCGCCGGCTACGCGGAGCTGCATGCGGCGCC
GCGCGGCGCGATGGTCGCCGTCAGCGGAATGGTCGCGACGAGCGCGGACGATCTCGCCGCGCGCAGGCTGCTCGACCGGC
TCGCCGCGCATCGCGTCGAACGCCGGTACGACGTCGCGCAGGACGATGCGCAGAGCATCGGCGAATCGCTCGGCGTATCG
GGCGCGACGGTCGCTTATGCGGGGCACGGGCGTTTCCGGGTGTCGGGCGTCGTGCCGGACCTGTCGCGACTGCGCGCGGC
CGTCGAGCGGGTGCGTGCGGATGTCGGGCCGAACGTGCGTGCGATCGAAGTGGATGCGCGCCAGTCCGGCGAGGCGCCGG
TGCCCGTCGCGTATTCGGGAATGCTCGAGATCGGCGACGTGCGCTACATCGAGACGCCGGACGGCGTGAAGCACGTGTTT
GCGGGCGCGCCGGCGCTCAACTGA

Upstream 100 bases:

>100_bases
GGCGCGATCGACGCGGCGCATCGCGGCGGGATCGATTCGCACGATTCGAGCGACTCGATCGAGGCAATGAAGCATACGAC
GCGAGGATGGGGAGCGACCG

Downstream 100 bases:

>100_bases
CGGGATTCAACTGACGGGAGAAGCGGCATGTACGAAGCATTGGAAAGGGTCGCGGGCGAGGTCGGCTCGCTCGAGCAGGC
GCTCGCGGCGCCCGACGCGG

Product: putative type III secretion apparatus protein

Products: NA

Alternate protein names: Type III Secretion Apparatus Protein; HrpD5 Protein; Type III Secretion Protein SctD; Serine Protease

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKLLRILTGLHAGVEIALDAGEHRIGAGDDAEIRITDWRDGDLLLSIDAQGVTRARRAAGMPPETAADRFDADGSPLLML
DFVPVPFGETALCVGPEQGAWPSDLELLATLWAPPPGADAARRGAQRKLAACAAAGGALVAGLLAMGAMLASAHPSAPPA
VETVDALASRLGGELERAGYAELHAAPRGAMVAVSGMVATSADDLAARRLLDRLAAHRVERRYDVAQDDAQSIGESLGVS
GATVAYAGHGRFRVSGVVPDLSRLRAAVERVRADVGPNVRAIEVDARQSGEAPVPVAYSGMLEIGDVRYIETPDGVKHVF
AGAPALN

Sequences:

>Translated_327_residues
MKLLRILTGLHAGVEIALDAGEHRIGAGDDAEIRITDWRDGDLLLSIDAQGVTRARRAAGMPPETAADRFDADGSPLLML
DFVPVPFGETALCVGPEQGAWPSDLELLATLWAPPPGADAARRGAQRKLAACAAAGGALVAGLLAMGAMLASAHPSAPPA
VETVDALASRLGGELERAGYAELHAAPRGAMVAVSGMVATSADDLAARRLLDRLAAHRVERRYDVAQDDAQSIGESLGVS
GATVAYAGHGRFRVSGVVPDLSRLRAAVERVRADVGPNVRAIEVDARQSGEAPVPVAYSGMLEIGDVRYIETPDGVKHVF
AGAPALN
>Mature_327_residues
MKLLRILTGLHAGVEIALDAGEHRIGAGDDAEIRITDWRDGDLLLSIDAQGVTRARRAAGMPPETAADRFDADGSPLLML
DFVPVPFGETALCVGPEQGAWPSDLELLATLWAPPPGADAARRGAQRKLAACAAAGGALVAGLLAMGAMLASAHPSAPPA
VETVDALASRLGGELERAGYAELHAAPRGAMVAVSGMVATSADDLAARRLLDRLAAHRVERRYDVAQDDAQSIGESLGVS
GATVAYAGHGRFRVSGVVPDLSRLRAAVERVRADVGPNVRAIEVDARQSGEAPVPVAYSGMLEIGDVRYIETPDGVKHVF
AGAPALN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33875; Mature: 33875

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLRILTGLHAGVEIALDAGEHRIGAGDDAEIRITDWRDGDLLLSIDAQGVTRARRAAG
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHCC
MPPETAADRFDADGSPLLMLDFVPVPFGETALCVGPEQGAWPSDLELLATLWAPPPGADA
CCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCHH
ARRGAQRKLAACAAAGGALVAGLLAMGAMLASAHPSAPPAVETVDALASRLGGELERAGY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCH
AELHAAPRGAMVAVSGMVATSADDLAARRLLDRLAAHRVERRYDVAQDDAQSIGESLGVS
HHHHCCCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
GATVAYAGHGRFRVSGVVPDLSRLRAAVERVRADVGPNVRAIEVDARQSGEAPVPVAYSG
CCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECC
MLEIGDVRYIETPDGVKHVFAGAPALN
CEEECCEEEEECCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKLLRILTGLHAGVEIALDAGEHRIGAGDDAEIRITDWRDGDLLLSIDAQGVTRARRAAG
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHCC
MPPETAADRFDADGSPLLMLDFVPVPFGETALCVGPEQGAWPSDLELLATLWAPPPGADA
CCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCHH
ARRGAQRKLAACAAAGGALVAGLLAMGAMLASAHPSAPPAVETVDALASRLGGELERAGY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCH
AELHAAPRGAMVAVSGMVATSADDLAARRLLDRLAAHRVERRYDVAQDDAQSIGESLGVS
HHHHCCCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
GATVAYAGHGRFRVSGVVPDLSRLRAAVERVRADVGPNVRAIEVDARQSGEAPVPVAYSG
CCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECC
MLEIGDVRYIETPDGVKHVFAGAPALN
CEEECCEEEEECCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA