Definition Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence.
Accession NC_009075
Length 3,127,456

Click here to switch to the map view.

The map label for this gene is 126442730

Identifier: 126442730

GI number: 126442730

Start: 883236

End: 883961

Strand: Reverse

Name: 126442730

Synonym: BURPS668_A0905

Alternate gene names: NA

Gene position: 883961-883236 (Counterclockwise)

Preceding gene: 126444500

Following gene: 126445314

Centisome position: 28.26

GC content: 68.04

Gene sequence:

>726_bases
ATGACTGCATATGCGATCGTGCTGTTGATCGGCGTCGTCGCGGGCGTCGTCAGCGGCGTCATCGGCACCGGGGCGTCGAT
CATGCTCCTGCCGCCGCTCGTGTTCTACTTCGGAGCGAAGCAGGCCGTGCCGATCATGGCGATCGCCGCCGTGCTGGGCA
ACGTCTCGCGCGCCTATGTGTGGCGCCGCGACATCGACTGGACAGCGTTCTTCGCGTATTCGATCGCCGCCGCGCCGGCC
GCCGCGCTCGGCGCCAATACGCTGTGGGCGCTCAATCCGCAATGGGTCGATTGCGCGCTCGGCGTGTTCTTCCTGTCGAT
GATCCCGTACCGATACATCGCGCGCCGAAGCACGTTTGCGCTCACCGCGTGGCAGCTCGCGGCGGCGGGCGCGGTGGTCG
GCTATCTGACGGGCATCGTATTCTCGACGGGGCCGCTCACGCTGCCGATCTTCTCCGCGTACGGCCTCCTCAAGGGCGGG
CTGCTCGCGACCGAAGCCGCGGCGTCGCTCGCCGTCTACGCGAGCAAGCTCGTCGCGTTCGGACAGCTCGGCGGACTGCC
GCTCGACGTGGCGATCAAGGGCGCGCTCGTCGGCCTGTCGCTGTCCGCGGGCATTTCGGTCGGCAAGGCGGTCACGCTGC
GGCTGTCGACGAACGCGTTCCAGCGGCTGCTCGATCTCGTGATGCTGTCGGCGGGCACGACGCTGTTATGGGGCGCTATA
CGCTGA

Upstream 100 bases:

>100_bases
CACGGACACGTGAAATTTTAGCACTGTGGCCGGCTCACCGATTGGCTAGCATGTTGGATTGTCCCCTATTCGGAGGCAAC
CTGATCGACAAGGAATGTTC

Downstream 100 bases:

>100_bases
ATCGCCGATTCGCGCCGTCAGCCGGTCGCACACTCGCTCAATCCCCGATTCGCCGATTCGTCGATTCGTCGATTCGCCGA
GTCGGCACGCGCGCGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTAYAIVLLIGVVAGVVSGVIGTGASIMLLPPLVFYFGAKQAVPIMAIAAVLGNVSRAYVWRRDIDWTAFFAYSIAAAPA
AALGANTLWALNPQWVDCALGVFFLSMIPYRYIARRSTFALTAWQLAAAGAVVGYLTGIVFSTGPLTLPIFSAYGLLKGG
LLATEAAASLAVYASKLVAFGQLGGLPLDVAIKGALVGLSLSAGISVGKAVTLRLSTNAFQRLLDLVMLSAGTTLLWGAI
R

Sequences:

>Translated_241_residues
MTAYAIVLLIGVVAGVVSGVIGTGASIMLLPPLVFYFGAKQAVPIMAIAAVLGNVSRAYVWRRDIDWTAFFAYSIAAAPA
AALGANTLWALNPQWVDCALGVFFLSMIPYRYIARRSTFALTAWQLAAAGAVVGYLTGIVFSTGPLTLPIFSAYGLLKGG
LLATEAAASLAVYASKLVAFGQLGGLPLDVAIKGALVGLSLSAGISVGKAVTLRLSTNAFQRLLDLVMLSAGTTLLWGAI
R
>Mature_240_residues
TAYAIVLLIGVVAGVVSGVIGTGASIMLLPPLVFYFGAKQAVPIMAIAAVLGNVSRAYVWRRDIDWTAFFAYSIAAAPAA
ALGANTLWALNPQWVDCALGVFFLSMIPYRYIARRSTFALTAWQLAAAGAVVGYLTGIVFSTGPLTLPIFSAYGLLKGGL
LATEAAASLAVYASKLVAFGQLGGLPLDVAIKGALVGLSLSAGISVGKAVTLRLSTNAFQRLLDLVMLSAGTTLLWGAIR

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24960; Mature: 24829

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYAIVLLIGVVAGVVSGVIGTGASIMLLPPLVFYFGAKQAVPIMAIAAVLGNVSRAYV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHEE
WRRDIDWTAFFAYSIAAAPAAALGANTLWALNPQWVDCALGVFFLSMIPYRYIARRSTFA
EECCCCHHHHHHHHHHHCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
LTAWQLAAAGAVVGYLTGIVFSTGPLTLPIFSAYGLLKGGLLATEAAASLAVYASKLVAF
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GQLGGLPLDVAIKGALVGLSLSAGISVGKAVTLRLSTNAFQRLLDLVMLSAGTTLLWGAI
HHCCCCEEHHEEHHHHEEEEHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHEEECC
R
C
>Mature Secondary Structure 
TAYAIVLLIGVVAGVVSGVIGTGASIMLLPPLVFYFGAKQAVPIMAIAAVLGNVSRAYV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHEE
WRRDIDWTAFFAYSIAAAPAAALGANTLWALNPQWVDCALGVFFLSMIPYRYIARRSTFA
EECCCCHHHHHHHHHHHCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
LTAWQLAAAGAVVGYLTGIVFSTGPLTLPIFSAYGLLKGGLLATEAAASLAVYASKLVAF
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GQLGGLPLDVAIKGALVGLSLSAGISVGKAVTLRLSTNAFQRLLDLVMLSAGTTLLWGAI
HHCCCCEEHHEEHHHHEEEEHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHEEECC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA