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The map label for this gene is ytmO [H]

Identifier: 126442670

GI number: 126442670

Start: 2328728

End: 2329525

Strand: Reverse

Name: ytmO [H]

Synonym: BURPS668_A2406

Alternate gene names: 126442670

Gene position: 2329525-2328728 (Counterclockwise)

Preceding gene: 126443156

Following gene: 126444582

Centisome position: 74.49

GC content: 73.06

Gene sequence:

>798_bases
ATGTCTTATTCGTTATCGCTGCTGGACAAGAGCCCGATCGCCGAAGGCGCGACGGCGGCCGACGCGCTGCGCTTCACGGT
CGCGCTCGCGCAGCGCGCCGAGGCGCTCGGCTATCGCCGCTTCTGGATCGCCGAGCATCATGGCGCGCCGGGGCTCGCGA
GCTCCGCGCCCGAGATCGTCGTGTCGCATGTGCTCGCGCATACGTCGTCGATCCGCGTCGGCTCGGGCGGCGTGATGCTT
CAGCACTACAGCCCGTTCAAGGTCGCCGAGACGTTCAAGCTGCTCGCGTCGCTCGCGCCCGGGCGCGTCGATCTCGGCGT
CGGCAAGGCGCCGGGCGGCCTGCCGCTCACGACGCGCGCGCTGCAATCGCTGCACGACAAGCCGCGCCGGCCCGCGTTTG
CCGAGCAGCTCGCCGAGCTCGACGCGTTCCTGAACTGGGGCGTCGCCGAGGATCATCCGCTCGCCGGCGCGCTCGCGCTG
CCGGTGCCGCCCGAGGCGCCGGAGCGCGTGCTGCTCGGCGGCTCGCCCGAGAGCGCCGCGCTCGCCGCGCGGCTCGGCTG
GCAGTTCTGCTATGCCGGGCACTTCAACGGCGACGAGGCGAACGTCGAGCGCTCGCTCGACGCCTACCGCAGCGCGACGG
GGCGCGCGCCGCTGCTCGCGCTGTACGCGGTGGCCGCGTCGACGAAGGGCGACGCCGAGCGGCTGATCGGCGCGCTGCGG
ATCTTCAAGCTGAAGCTCGCGAGCGGCCAGAGCGTCAATCTCGGCAGCGCGCAGGCGGCGGCCGAGTTCGCGCGCTAG

Upstream 100 bases:

>100_bases
CGCGCGCAGGCCGGGCGGCCGGGCGGCGCGTTCGGGTGGCGCGCCGCCGGATCGCCTGTTTCTTTCGACTGATTTTCCCT
GGCCCGCATTCGTACCCGCC

Downstream 100 bases:

>100_bases
AGCGGGGCGACCGACTATCGGATCGACGAACTGCGTCCGCACGTGATCGCCGGCGCGCCGGACGACGTGCACCGCGAGCT
CGACGCGCTGTCGCGCCGCT

Product: luciferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIVVSHVLAHTSSIRVGSGGVML
QHYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRALQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALAL
PVPPEAPERVLLGGSPESAALAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAASTKGDAERLIGALR
IFKLKLASGQSVNLGSAQAAAEFAR

Sequences:

>Translated_265_residues
MSYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIVVSHVLAHTSSIRVGSGGVML
QHYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRALQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALAL
PVPPEAPERVLLGGSPESAALAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAASTKGDAERLIGALR
IFKLKLASGQSVNLGSAQAAAEFAR
>Mature_264_residues
SYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIVVSHVLAHTSSIRVGSGGVMLQ
HYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRALQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALALP
VPPEAPERVLLGGSPESAALAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAASTKGDAERLIGALRI
FKLKLASGQSVNLGSAQAAAEFAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=260, Percent_Identity=37.6923076923077, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 27780; Mature: 27649

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIV
CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH
VSHVLAHTSSIRVGSGGVMLQHYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRA
HHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH
LQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALALPVPPEAPERVLLGGSPESAA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCHHH
LAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAASTKGDAERLIGALR
HHHHHCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
IFKLKLASGQSVNLGSAQAAAEFAR
HHHEEECCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIV
CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH
VSHVLAHTSSIRVGSGGVMLQHYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRA
HHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH
LQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALALPVPPEAPERVLLGGSPESAA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCHHH
LAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAASTKGDAERLIGALR
HHHHHCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
IFKLKLASGQSVNLGSAQAAAEFAR
HHHEEECCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]