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The map label for this gene is 126442596

Identifier: 126442596

GI number: 126442596

Start: 157393

End: 158463

Strand: Reverse

Name: 126442596

Synonym: BURPS668_A0170

Alternate gene names: NA

Gene position: 158463-157393 (Counterclockwise)

Preceding gene: 126443395

Following gene: 126444936

Centisome position: 5.07

GC content: 67.13

Gene sequence:

>1071_bases
ATGAATGCCACCCCACCCGCCGCCGCGCTGCGCTATGCGGATCTTCTCGAGCCCGTCTCGCCGGACGCACCCTGCGGGCC
GGACCTCGAATACGATCCGGCGTTCGTGATGCTGCAATCCGCGATCGCGCCGAGGAAAGATGCGCAATATGGCGAGTTCG
TCGAAGCGCCTCAGCCCGCGAACTGGGCCGAGGCCGAACGCGATTGCCTCGCGCTGCTGCTGCGCACGAAAGACATCCGG
CTCGTCGTGATCCTGATGCGATGCCGAATCCGCCAGAGCGGCGCGGAGGGCCTGCGCGACGGCCTCGCGCTGCTCAACGA
GTTGCTCGCGCGCTACGGTGAGGCGCTGCACCCCGTACCGTTCTTCGAAGGCGAACGCGATCCCGTGGTCTATGCGAATG
CGATCGCCACGCTGGCGGACCCCGATGCGACGCTCGCGGATATTCGGGAAATCCCGTTGCCCAAGGCGAGCGGCCTGCAA
TTGCAGTTGCGCGACATCGAAAAGGCGCTCGCGGTGACGCGCGTGAAAGACGCACTCGCGCCCGAATCGGCCAGCCGGCT
GCTGAAGGAATGGTGGAATCGGCGCGACAAGACGATCGCGGCGCTCGCGCAAGCCCAGCGCATCGTGGCCGATCTGATCG
CGTCGACCCGCGAGTCGCTCGGCGACGACGCGCCCGACCTGTCCGGCATCGCGAAACTGCTGCATCCGTTTGCGCAAGCG
CAACTGGAATCGCCGTATTCGGCAAACGCCGCTCAACCGCAAGGCGACGCGAAGCCGGCGACCGGCGACGCCGCGCATGC
GCGCGCCGCCGATACGTCCGCCCAGGCAGGCGATACCGACACGCAAGCGCCCGCTGCGATGCCGATCGCGCCTGCCCAAC
CGCCGATGGATCGCTGGGGCGCGCTGGCGGCCATTCAGGCGACGCGCCTTTGGTTCGAGCAAAACGAGCCGAGCAGCCCG
GTAATCGTGCTGCTGCGCCAGTCGGAGCGGATGGTCGGCAAGCGCTTTTCGGAAATCGCCAATGCGATTCCCGCCGAACT
GCTCGCGCAATGGGATGCGATCGACGTCTAG

Upstream 100 bases:

>100_bases
CTATTCGACCTGGCTCGGCGAATCGAGGGACGACAGGCCGGTCGTCGGCATGGTGTTCGAGCCGGAAAAATACTGTTCCT
GATCTGGAGAGAGCTCATCG

Downstream 100 bases:

>100_bases
ATCCGCCATTGCCCGCGCAACGCTCTCCGTTCCACCGACCATCCCACCTATCGAATGAAGAAAAAATTCTCAAGATTCCT
TGCGGCCCTCGTCTTGCTCG

Product: ImpA-like N-terminal family protein

Products: NA

Alternate protein names: Type VI Secretion-Associated Protein ImpA Family; Cytoplasmic Protein; ImpA Family Type VI Secretion-Associated Protein; ImpA Domain Protein; ImpA-Like; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; ImpA-Related N-Terminal Domain-Containing; Type VI Secretion-Associated Protein; Conserved Protein; Type VI Secretion System Protein ImpA; ImpA-Related N-Terminal Family Protein; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MNATPPAAALRYADLLEPVSPDAPCGPDLEYDPAFVMLQSAIAPRKDAQYGEFVEAPQPANWAEAERDCLALLLRTKDIR
LVVILMRCRIRQSGAEGLRDGLALLNELLARYGEALHPVPFFEGERDPVVYANAIATLADPDATLADIREIPLPKASGLQ
LQLRDIEKALAVTRVKDALAPESASRLLKEWWNRRDKTIAALAQAQRIVADLIASTRESLGDDAPDLSGIAKLLHPFAQA
QLESPYSANAAQPQGDAKPATGDAAHARAADTSAQAGDTDTQAPAAMPIAPAQPPMDRWGALAAIQATRLWFEQNEPSSP
VIVLLRQSERMVGKRFSEIANAIPAELLAQWDAIDV

Sequences:

>Translated_356_residues
MNATPPAAALRYADLLEPVSPDAPCGPDLEYDPAFVMLQSAIAPRKDAQYGEFVEAPQPANWAEAERDCLALLLRTKDIR
LVVILMRCRIRQSGAEGLRDGLALLNELLARYGEALHPVPFFEGERDPVVYANAIATLADPDATLADIREIPLPKASGLQ
LQLRDIEKALAVTRVKDALAPESASRLLKEWWNRRDKTIAALAQAQRIVADLIASTRESLGDDAPDLSGIAKLLHPFAQA
QLESPYSANAAQPQGDAKPATGDAAHARAADTSAQAGDTDTQAPAAMPIAPAQPPMDRWGALAAIQATRLWFEQNEPSSP
VIVLLRQSERMVGKRFSEIANAIPAELLAQWDAIDV
>Mature_356_residues
MNATPPAAALRYADLLEPVSPDAPCGPDLEYDPAFVMLQSAIAPRKDAQYGEFVEAPQPANWAEAERDCLALLLRTKDIR
LVVILMRCRIRQSGAEGLRDGLALLNELLARYGEALHPVPFFEGERDPVVYANAIATLADPDATLADIREIPLPKASGLQ
LQLRDIEKALAVTRVKDALAPESASRLLKEWWNRRDKTIAALAQAQRIVADLIASTRESLGDDAPDLSGIAKLLHPFAQA
QLESPYSANAAQPQGDAKPATGDAAHARAADTSAQAGDTDTQAPAAMPIAPAQPPMDRWGALAAIQATRLWFEQNEPSSP
VIVLLRQSERMVGKRFSEIANAIPAELLAQWDAIDV

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38436; Mature: 38436

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATPPAAALRYADLLEPVSPDAPCGPDLEYDPAFVMLQSAIAPRKDAQYGEFVEAPQPA
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCC
NWAEAERDCLALLLRTKDIRLVVILMRCRIRQSGAEGLRDGLALLNELLARYGEALHPVP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FFEGERDPVVYANAIATLADPDATLADIREIPLPKASGLQLQLRDIEKALAVTRVKDALA
CCCCCCCCEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHC
PESASRLLKEWWNRRDKTIAALAQAQRIVADLIASTRESLGDDAPDLSGIAKLLHPFAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QLESPYSANAAQPQGDAKPATGDAAHARAADTSAQAGDTDTQAPAAMPIAPAQPPMDRWG
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ALAAIQATRLWFEQNEPSSPVIVLLRQSERMVGKRFSEIANAIPAELLAQWDAIDV
HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNATPPAAALRYADLLEPVSPDAPCGPDLEYDPAFVMLQSAIAPRKDAQYGEFVEAPQPA
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCC
NWAEAERDCLALLLRTKDIRLVVILMRCRIRQSGAEGLRDGLALLNELLARYGEALHPVP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FFEGERDPVVYANAIATLADPDATLADIREIPLPKASGLQLQLRDIEKALAVTRVKDALA
CCCCCCCCEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHC
PESASRLLKEWWNRRDKTIAALAQAQRIVADLIASTRESLGDDAPDLSGIAKLLHPFAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QLESPYSANAAQPQGDAKPATGDAAHARAADTSAQAGDTDTQAPAAMPIAPAQPPMDRWG
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ALAAIQATRLWFEQNEPSSPVIVLLRQSERMVGKRFSEIANAIPAELLAQWDAIDV
HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA