| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126442433
Identifier: 126442433
GI number: 126442433
Start: 1047723
End: 1048262
Strand: Reverse
Name: 126442433
Synonym: BURPS668_A1089
Alternate gene names: NA
Gene position: 1048262-1047723 (Counterclockwise)
Preceding gene: 126444324
Following gene: 126444315
Centisome position: 33.52
GC content: 71.3
Gene sequence:
>540_bases ATGTCGGCCACGTCGCCGATGCGCGCGACGTCGCCGCCTGCGACGCGAATCGCACGAATCGCACGAATCGCGCGGATCAT GCGAATCACGCGGACCACGCGAATCGCGAGCAGTGCTGAGAATCACGAGAACGGACGCGGCGTCGCCGCAAGGCCGGATT CGCCGCCGACGCTCGACATGCGCCGCGAACCGAATCGTCGGCTTCCGGGCGCGCCGCCGCTCGAGCGGTTCGCCGCGGCG GCGCGCGGCGGCGAACCGGTCTCGGCGGCGCATTGCACGGCCGCCTCGCACGCTCGCGTCGCGGCAAAGACGGTTCATCC ATGGAAATGCGGGCGAGCGAAGCCCTGGGCACGCAGCTTCCAAGATGCCGGATACCGGGACGGCCACACACGACTATGCG CGTCGAACCGGCCGTTCGCCGAGTCGTGCTCGACATGCCGCCGGCAGGCCGGCGCGGCGAGCGTCGCACATGAAACGGGC CGCGCCGGCTGCGAGCGTCGCGGCCCGATCGCGACGCGGACGAGCGCCAGGCACGACTAA
Upstream 100 bases:
>100_bases AGGCAGTTGCGCGGCACGGCGACCGCGCGGCGAGGCGAGGCGAGGCGAGCGCGAACGCGAACGCGAACGCAGCGATTCGA TGCCGGTTTTGCACACCAGG
Downstream 100 bases:
>100_bases CCCGCGTGCCGCCGTCGGCCCGACGCTTCTCGCGCGCCACTCGTCTCGATCACCCGCATGGCGCGACGCGCCCCGGGCGT CACGGTGCCGTCGATCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSATSPMRATSPPATRIARIARIARIMRITRTTRIASSAENHENGRGVAARPDSPPTLDMRREPNRRLPGAPPLERFAAA ARGGEPVSAAHCTAASHARVAAKTVHPWKCGRAKPWARSFQDAGYRDGHTRLCASNRPFAESCSTCRRQAGAASVAHETG RAGCERRGPIATRTSARHD
Sequences:
>Translated_179_residues MSATSPMRATSPPATRIARIARIARIMRITRTTRIASSAENHENGRGVAARPDSPPTLDMRREPNRRLPGAPPLERFAAA ARGGEPVSAAHCTAASHARVAAKTVHPWKCGRAKPWARSFQDAGYRDGHTRLCASNRPFAESCSTCRRQAGAASVAHETG RAGCERRGPIATRTSARHD >Mature_178_residues SATSPMRATSPPATRIARIARIARIMRITRTTRIASSAENHENGRGVAARPDSPPTLDMRREPNRRLPGAPPLERFAAAA RGGEPVSAAHCTAASHARVAAKTVHPWKCGRAKPWARSFQDAGYRDGHTRLCASNRPFAESCSTCRRQAGAASVAHETGR AGCERRGPIATRTSARHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19267; Mature: 19136
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATSPMRATSPPATRIARIARIARIMRITRTTRIASSAENHENGRGVAARPDSPPTLDM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC RREPNRRLPGAPPLERFAAAARGGEPVSAAHCTAASHARVAAKTVHPWKCGRAKPWARSF CCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH QDAGYRDGHTRLCASNRPFAESCSTCRRQAGAASVAHETGRAGCERRGPIATRTSARHD HHCCCCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SATSPMRATSPPATRIARIARIARIMRITRTTRIASSAENHENGRGVAARPDSPPTLDM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC RREPNRRLPGAPPLERFAAAARGGEPVSAAHCTAASHARVAAKTVHPWKCGRAKPWARSF CCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH QDAGYRDGHTRLCASNRPFAESCSTCRRQAGAASVAHETGRAGCERRGPIATRTSARHD HHCCCCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA