| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126442405
Identifier: 126442405
GI number: 126442405
Start: 1056694
End: 1057926
Strand: Reverse
Name: 126442405
Synonym: BURPS668_A1100
Alternate gene names: NA
Gene position: 1057926-1056694 (Counterclockwise)
Preceding gene: 126443180
Following gene: 126445510
Centisome position: 33.83
GC content: 62.85
Gene sequence:
>1233_bases ATGTCGAGAACCGGATTCATGCCACTCTCCACGCTCGCGACGATGGCCGTCGCGGCCGCCATCAGCACACCGGCGGCATT CGCCGAATCCGCGCCCGTTTCCGGCAACGGGGGCATTCCTTCGTTCTATCGATGGACGGACAAGTTGCCGCAGACGCGCG GCCAGATGTTGCGCACCGAAGTGCTGACACCACGGCAAGGTCTTGCCGCTGCGGGGCAGAACCTCCGCATCCTGTATACG TCGACCGACGGAATTGACGGCCACACGCCGATTGTCGTGTCCGGTGCGTTGTTCGTGCCGAAGGGGACGCCGCCGCAAGG CGGCTGGCCGTTGATGGCATGGGCACACGGCACGGTCGGCAGCGCCGACATATGCGCGCCATCGTATGCGGGCCATAGCG AACGCGATGTCCGCTACCTGAGCCATTGGCTCGCGCAGGGATACGCAATTGTCGCGACCGACTACCAAGGGCTTGGTGCG TCCGGTCCCCATCCGTACGGGCTGACTCGTCCGCTCGCGTATAGCGTACTCGACAGCATTCGCGCTGTTCAGAACGGCGG CTTCGAATTGTCGCCGAAACGAATCGTCGTGTTCGGACAGTCGCAAGGCGGCCGGGCCGCATTTGCAACGGCCGTCTACG CAAAGTCCTATGCGCCCGAGCTGGACATCGGCGGCGTGGTGGCAACCGGCACGCCATACGCGACGATTCGCCATCGCGCG GATGATGCGGAACACTCGAAATTGCACCGCTCGGTGATCCATAACATACTGCGGCTCAACGCCACCCCGAAGCTCCTCGA TCCGTCGTTCGCCACGTCCGACTATCTGACCGAACGCGCGACGCCGGCATTCGAGTTCAGCCAGCACGCGTGTCTGCACG CAATCAAGCAGAAGATCGCCTCGGACGGTCTCACGTTCGAAAATAGCTTCAAACGCTCGCCGCAACCCGTGCTCGACTGG ATCAGACGCGAAGCGGCCTACCCGACGCTGAAGTCGGCAATCCCGATCTTCATCGGCACGGGCGGCAAGGATCGCAACGT GCCCGTTTCGGATCAGGCCGCGCTCGTTAAAGACGCTTGCGAAGCCGGCGACCGAATCGAGTGGCACGTCTATCCCGCAC TCGACCATTCGGAGACCGTCAACGGATCGCTATCCGATTCGACACCGTTCGTCGCAAGAGCGTTTGCCGGCGAGCACATC GACGGCAATTGCGCGTCTTTGCCGTCGCCTTAG
Upstream 100 bases:
>100_bases ATGTGGGACGACACGTTCGAAATAGCGTCAGGCGTCGGCATTTCGCGTTCGATCCCAAAGCGCCCGTCTACCGAGACGAA CTCTAGAAGAGGCATCACTT
Downstream 100 bases:
>100_bases GCCACACGCTTCACGGCGCCCATGCGCGGCAGGCCCTGCGCCGCGAGGCAAGCTCCGTGGGACACCGGCGCGCAAGAGAG AAACGGGCGAACCATGTCTG
Product: putative secretory lipase
Products: NA
Alternate protein names: Triacylglycerol Lipase; Lipase; Secreted Protein; Exported Lipase; Secretory Lipase Family Protein; Alkaline Lipase; Alpha/Beta Hydrolase; Acetyl Esterase; Secretory Lipase Family; Signal Peptide; Lipase Family Protein; Lipoprotein
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSRTGFMPLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKLPQTRGQMLRTEVLTPRQGLAAAGQNLRILYT STDGIDGHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVGSADICAPSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGA SGPHPYGLTRPLAYSVLDSIRAVQNGGFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRA DDAEHSKLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIASDGLTFENSFKRSPQPVLDW IRREAAYPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDACEAGDRIEWHVYPALDHSETVNGSLSDSTPFVARAFAGEHI DGNCASLPSP
Sequences:
>Translated_410_residues MSRTGFMPLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKLPQTRGQMLRTEVLTPRQGLAAAGQNLRILYT STDGIDGHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVGSADICAPSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGA SGPHPYGLTRPLAYSVLDSIRAVQNGGFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRA DDAEHSKLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIASDGLTFENSFKRSPQPVLDW IRREAAYPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDACEAGDRIEWHVYPALDHSETVNGSLSDSTPFVARAFAGEHI DGNCASLPSP >Mature_409_residues SRTGFMPLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKLPQTRGQMLRTEVLTPRQGLAAAGQNLRILYTS TDGIDGHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVGSADICAPSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGAS GPHPYGLTRPLAYSVLDSIRAVQNGGFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRAD DAEHSKLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIASDGLTFENSFKRSPQPVLDWI RREAAYPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDACEAGDRIEWHVYPALDHSETVNGSLSDSTPFVARAFAGEHID GNCASLPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43752; Mature: 43620
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTGFMPLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKLPQTRGQMLRTE CCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHH VLTPRQGLAAAGQNLRILYTSTDGIDGHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVG HCCCCHHHHHCCCCEEEEEEECCCCCCCCCEEEECEEEECCCCCCCCCCCEEEEECCCCC SADICAPSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGASGPHPYGLTRPLAYSVLDSI CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH RAVQNGGFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRA HHHHCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECC DDAEHSKLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH SDGLTFENSFKRSPQPVLDWIRREAAYPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDAC HCCCEECCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHH EAGDRIEWHVYPALDHSETVNGSLSDSTPFVARAFAGEHIDGNCASLPSP HCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SRTGFMPLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKLPQTRGQMLRTE CCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHH VLTPRQGLAAAGQNLRILYTSTDGIDGHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVG HCCCCHHHHHCCCCEEEEEEECCCCCCCCCEEEECEEEECCCCCCCCCCCEEEEECCCCC SADICAPSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGASGPHPYGLTRPLAYSVLDSI CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH RAVQNGGFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRA HHHHCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECC DDAEHSKLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH SDGLTFENSFKRSPQPVLDWIRREAAYPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDAC HCCCEECCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHH EAGDRIEWHVYPALDHSETVNGSLSDSTPFVARAFAGEHIDGNCASLPSP HCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA