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The map label for this gene is ydcN [C]

Identifier: 126442387

GI number: 126442387

Start: 1854021

End: 1854305

Strand: Reverse

Name: ydcN [C]

Synonym: BURPS668_A1907

Alternate gene names: 126442387

Gene position: 1854305-1854021 (Counterclockwise)

Preceding gene: 126443307

Following gene: 126444458

Centisome position: 59.29

GC content: 75.09

Gene sequence:

>285_bases
ATGACGGCGCTCGTCCAGCGCTTCGGCGCGGCGATCCGCCAGTTGCGCGAGGCGCGCGCGTGGTCGCAGGAGCAGCTCGC
GGAACACCCGGGGTTGAACCGCTCGTACGTCGGCGAGATCGAGCGCGGCACCGCGATCGCGTCGATCGTCACCGTCGACA
AGCTCGCCCGCGCATTCGGCGTGCCGATCGCGCGGCTGCTGTCGCCCGCCGGCGATGCGGGGCCGCCGCCGCACGGATTC
GGCGCGCCGCCGGCGTCGAGCGCGCCGCTGTCGAGCACGCGCTGA

Upstream 100 bases:

>100_bases
TCACGCGCAGCGATCCGGCGCGGCCGGCCGACGCGGCCGCCTCGTCGCCGCGGCCGGCCGGCGCGCACGACGCGACGCTT
TCGGCCGCGCAGGCGCTGCG

Downstream 100 bases:

>100_bases
GCTGCCGTCCGATCTCCGCGAATTGTCGTCTATAGCATGTTGAGCCGCCCGAACGGCGTCTCGATAATGCGTTCTCCTGA
TAAGCATTTTCGATTTCGTT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Protein; SgrAlc Control Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTALVQRFGAAIRQLREARAWSQEQLAEHPGLNRSYVGEIERGTAIASIVTVDKLARAFGVPIARLLSPAGDAGPPPHGF
GAPPASSAPLSSTR

Sequences:

>Translated_94_residues
MTALVQRFGAAIRQLREARAWSQEQLAEHPGLNRSYVGEIERGTAIASIVTVDKLARAFGVPIARLLSPAGDAGPPPHGF
GAPPASSAPLSSTR
>Mature_93_residues
TALVQRFGAAIRQLREARAWSQEQLAEHPGLNRSYVGEIERGTAIASIVTVDKLARAFGVPIARLLSPAGDAGPPPHGFG
APPASSAPLSSTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9843; Mature: 9712

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALVQRFGAAIRQLREARAWSQEQLAEHPGLNRSYVGEIERGTAIASIVTVDKLARAFG
CHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC
VPIARLLSPAGDAGPPPHGFGAPPASSAPLSSTR
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TALVQRFGAAIRQLREARAWSQEQLAEHPGLNRSYVGEIERGTAIASIVTVDKLARAFG
HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC
VPIARLLSPAGDAGPPPHGFGAPPASSAPLSSTR
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA