Definition Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence.
Accession NC_009075
Length 3,127,456

Click here to switch to the map view.

The map label for this gene is 126442340

Identifier: 126442340

GI number: 126442340

Start: 380788

End: 382449

Strand: Reverse

Name: 126442340

Synonym: BURPS668_A0412

Alternate gene names: NA

Gene position: 382449-380788 (Counterclockwise)

Preceding gene: 126443329

Following gene: 126444430

Centisome position: 12.23

GC content: 68.41

Gene sequence:

>1662_bases
ATGAAACGCAACAGTAAGCAGTTCGAAATCGGCGCATGGCTGGGCGCGTGCGCGCTCGCCTTCGCCGGCGCGGCTTCGGC
CGCCGCCGTCCAGGATCGCGATCACGACAGCCGCCCCGTCGACGCGAAGCGCGTGCTGCTGGTGAGCATTGATGGTCTGC
ACGAGCAGGACCTCACGCGCTGCATCGGCGCGAATACGTGCCCGAATCTCGCGCTGCTCGCGAAATCGGGGGTCACGTAC
ACGAACGCGCGCACGCCGGGGCTGTCGGATTCGTTCCCGGGCCTGGCCGCGCTGGTGACGGGCGGTTCGCCGAAGAGCGC
GGGCCTCTTCTACGACGTGTCGTACGATCGCACGCTGTACGCACCGTCGGATGCGACGTGCTCGGGCAAGCAAGGCTGGA
ACGTCGTGTTCGACGAAACAACCGGCATCGACGCGATGAACGGCGGCGCGCTCACGCATCTCGACGGCGGCGGCGCGTTC
AACCCGCAGGCGATCCCGCACGCGCGCGTGAACGGCCAGTGCGTGAGCGTCTACCCGCACGACTACGTGAAGACGAACAC
GGTGTTCGAAGTCGTCAAGGAACATCTGCGCGGCTCGCACACCGCATGGGCGGACAAGCACGCGTGGGGCTACGACTGGG
TGAACGGCCCATCGGGCAAGGGCGTCGACGATCTCGCGCGCACCGAGATCAACTCGATCGATCCGGCCACGGGCACCCCC
TATACCGACATCTATACGCATACCGAAAAGTTCGACGACTATCACGTGCAGGCGATCGTCAACCAGATCGACGGCAAGAA
CTCGACGGGCACCGCGGCCGCGCCCGTGCCGACCCTGTTCGGCACGAACTTCCAGACGCTGTCGGTCGCGCAGAAGGCCA
CCGTCGCGTCGGGCGGCGGCTATCTCGACGCGAGCTTCACGCCGGGGCCGGAAGTCGCGAACGCGATCGCGTACGTCGAC
GGCGCGCTCGGCCGCATCGTCGCCGAGCTCAGGCAGCGCGGGCTGTACGATTCGACGGTGGTGATCGTCACCGCGAAGCA
CGGCCAGTCGCCGACCGACCATACGAAGCTCGTGAAGCACGGCGACACGCTCACCGCGCTGCTCGAGGCGAACGGCTTCG
TCGATCCGAACGGCAACTTCGGCCAGAACAACACCGCGTCGGGCAACCCGAACGACGGCACGGGCCTCGTCGGCACGGGC
TTCGTGCAGACCGACGACGTCGGCCTCGTCTGGCTGCGCGACCCGCGCCAGTTGAGCGCGGCCGTCGCGACACTGAAGGC
GAATCTCGGCTGCAACGCGCCGGGGATCTGCGCGGACGGCCCGCAGGCGTACATCCTGTATGGCCCGAGCGTCGCCGAGC
GCTTCGGCGATCCGGCGCTCGGCCGCACGCCGGACATCGTCGTGCAGCCGAACCCGGGCGTGATCTACACGTCGAGCAAG
AAGAAGGACGAAGAGCACGGCGGCAACGCGCCGGACGACAGCCACCTCGGCCTGCTCGTGTCATACGCGGGCTTGCGCCA
GGGCCGCACAATCGACGCGCCGGTGCTGACGACGCAGGTCGCGCCGACGATCCTGCGCTCGCTCGGCCTCGAGCCGCGCC
TGCTGCACGCGGTCGCGCTCGAAGGCACGCGCGTGCTGCCGGGCCTTGGCCTCGAGCGCTGA

Upstream 100 bases:

>100_bases
GACAGACAAACGAAAGCGGCGCGTCACGACGCGTTAGCAATCCCCGTGCAAATTGCGGCTCCGGGCGTGGGACACAGCCG
TTCTAGCGACGAGGTCAACG

Downstream 100 bases:

>100_bases
CGCAAGCGCCACGGGAGCGCGCCGGCGCCGGGCGAGGCCGGCGCGCCCCGTGGCCGGCGGCCGCCCCGACACGGCCCGAC
CCGCCGCGACGGAACTCGCC

Product: type I phosphodiesterase / nucleotide pyrophosphatase

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTRCIGANTCPNLALLAKSGVTY
TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF
NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP
YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD
GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG
FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK
KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER

Sequences:

>Translated_553_residues
MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTRCIGANTCPNLALLAKSGVTY
TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF
NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP
YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD
GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG
FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK
KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER
>Mature_553_residues
MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTRCIGANTCPNLALLAKSGVTY
TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF
NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP
YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD
GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG
FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK
KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58062; Mature: 58062

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTR
CCCCCCCEEHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHH
CIGANTCPNLALLAKSGVTYTNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLY
HHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEE
APSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAFNPQAIPHARVNGQCVSVYPH
CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
DYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGG
CHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHEEECCCC
YLDASFTPGPEVANAIAYVDGALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKH
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHC
GDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTGFVQTDDVGLVWLRDPRQLSA
CCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEECEEEECCEEEEEECCHHHHHH
AVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK
HHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCEEEECCCCEEEECCC
KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVAL
CCHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECC
EGTRVLPGLGLER
CCCEECCCCCCCC
>Mature Secondary Structure
MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTR
CCCCCCCEEHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHH
CIGANTCPNLALLAKSGVTYTNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLY
HHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEE
APSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAFNPQAIPHARVNGQCVSVYPH
CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
DYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGG
CHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHEEECCCC
YLDASFTPGPEVANAIAYVDGALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKH
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHC
GDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTGFVQTDDVGLVWLRDPRQLSA
CCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEECEEEECCEEEEEECCHHHHHH
AVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK
HHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCEEEECCCCEEEECCC
KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVAL
CCHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECC
EGTRVLPGLGLER
CCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA