| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126442340
Identifier: 126442340
GI number: 126442340
Start: 380788
End: 382449
Strand: Reverse
Name: 126442340
Synonym: BURPS668_A0412
Alternate gene names: NA
Gene position: 382449-380788 (Counterclockwise)
Preceding gene: 126443329
Following gene: 126444430
Centisome position: 12.23
GC content: 68.41
Gene sequence:
>1662_bases ATGAAACGCAACAGTAAGCAGTTCGAAATCGGCGCATGGCTGGGCGCGTGCGCGCTCGCCTTCGCCGGCGCGGCTTCGGC CGCCGCCGTCCAGGATCGCGATCACGACAGCCGCCCCGTCGACGCGAAGCGCGTGCTGCTGGTGAGCATTGATGGTCTGC ACGAGCAGGACCTCACGCGCTGCATCGGCGCGAATACGTGCCCGAATCTCGCGCTGCTCGCGAAATCGGGGGTCACGTAC ACGAACGCGCGCACGCCGGGGCTGTCGGATTCGTTCCCGGGCCTGGCCGCGCTGGTGACGGGCGGTTCGCCGAAGAGCGC GGGCCTCTTCTACGACGTGTCGTACGATCGCACGCTGTACGCACCGTCGGATGCGACGTGCTCGGGCAAGCAAGGCTGGA ACGTCGTGTTCGACGAAACAACCGGCATCGACGCGATGAACGGCGGCGCGCTCACGCATCTCGACGGCGGCGGCGCGTTC AACCCGCAGGCGATCCCGCACGCGCGCGTGAACGGCCAGTGCGTGAGCGTCTACCCGCACGACTACGTGAAGACGAACAC GGTGTTCGAAGTCGTCAAGGAACATCTGCGCGGCTCGCACACCGCATGGGCGGACAAGCACGCGTGGGGCTACGACTGGG TGAACGGCCCATCGGGCAAGGGCGTCGACGATCTCGCGCGCACCGAGATCAACTCGATCGATCCGGCCACGGGCACCCCC TATACCGACATCTATACGCATACCGAAAAGTTCGACGACTATCACGTGCAGGCGATCGTCAACCAGATCGACGGCAAGAA CTCGACGGGCACCGCGGCCGCGCCCGTGCCGACCCTGTTCGGCACGAACTTCCAGACGCTGTCGGTCGCGCAGAAGGCCA CCGTCGCGTCGGGCGGCGGCTATCTCGACGCGAGCTTCACGCCGGGGCCGGAAGTCGCGAACGCGATCGCGTACGTCGAC GGCGCGCTCGGCCGCATCGTCGCCGAGCTCAGGCAGCGCGGGCTGTACGATTCGACGGTGGTGATCGTCACCGCGAAGCA CGGCCAGTCGCCGACCGACCATACGAAGCTCGTGAAGCACGGCGACACGCTCACCGCGCTGCTCGAGGCGAACGGCTTCG TCGATCCGAACGGCAACTTCGGCCAGAACAACACCGCGTCGGGCAACCCGAACGACGGCACGGGCCTCGTCGGCACGGGC TTCGTGCAGACCGACGACGTCGGCCTCGTCTGGCTGCGCGACCCGCGCCAGTTGAGCGCGGCCGTCGCGACACTGAAGGC GAATCTCGGCTGCAACGCGCCGGGGATCTGCGCGGACGGCCCGCAGGCGTACATCCTGTATGGCCCGAGCGTCGCCGAGC GCTTCGGCGATCCGGCGCTCGGCCGCACGCCGGACATCGTCGTGCAGCCGAACCCGGGCGTGATCTACACGTCGAGCAAG AAGAAGGACGAAGAGCACGGCGGCAACGCGCCGGACGACAGCCACCTCGGCCTGCTCGTGTCATACGCGGGCTTGCGCCA GGGCCGCACAATCGACGCGCCGGTGCTGACGACGCAGGTCGCGCCGACGATCCTGCGCTCGCTCGGCCTCGAGCCGCGCC TGCTGCACGCGGTCGCGCTCGAAGGCACGCGCGTGCTGCCGGGCCTTGGCCTCGAGCGCTGA
Upstream 100 bases:
>100_bases GACAGACAAACGAAAGCGGCGCGTCACGACGCGTTAGCAATCCCCGTGCAAATTGCGGCTCCGGGCGTGGGACACAGCCG TTCTAGCGACGAGGTCAACG
Downstream 100 bases:
>100_bases CGCAAGCGCCACGGGAGCGCGCCGGCGCCGGGCGAGGCCGGCGCGCCCCGTGGCCGGCGGCCGCCCCGACACGGCCCGAC CCGCCGCGACGGAACTCGCC
Product: type I phosphodiesterase / nucleotide pyrophosphatase
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTRCIGANTCPNLALLAKSGVTY TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER
Sequences:
>Translated_553_residues MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTRCIGANTCPNLALLAKSGVTY TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER >Mature_553_residues MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTRCIGANTCPNLALLAKSGVTY TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58062; Mature: 58062
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTR CCCCCCCEEHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHH CIGANTCPNLALLAKSGVTYTNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLY HHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEE APSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAFNPQAIPHARVNGQCVSVYPH CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC DYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGG CHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHEEECCCC YLDASFTPGPEVANAIAYVDGALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKH EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHC GDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTGFVQTDDVGLVWLRDPRQLSA CCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEECEEEECCEEEEEECCHHHHHH AVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK HHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCEEEECCCCEEEECCC KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVAL CCHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECC EGTRVLPGLGLER CCCEECCCCCCCC >Mature Secondary Structure MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLTR CCCCCCCEEHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHH CIGANTCPNLALLAKSGVTYTNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLY HHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEE APSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAFNPQAIPHARVNGQCVSVYPH CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC DYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGG CHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHEEECCCC YLDASFTPGPEVANAIAYVDGALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKH EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHC GDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTGFVQTDDVGLVWLRDPRQLSA CCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEECEEEECCEEEEEECCHHHHHH AVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK HHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCEEEECCCCEEEECCC KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVAL CCHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECC EGTRVLPGLGLER CCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA