| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126442332
Identifier: 126442332
GI number: 126442332
Start: 1049103
End: 1049888
Strand: Reverse
Name: 126442332
Synonym: BURPS668_A1092
Alternate gene names: NA
Gene position: 1049888-1049103 (Counterclockwise)
Preceding gene: 126445098
Following gene: 126444324
Centisome position: 33.57
GC content: 66.28
Gene sequence:
>786_bases ATGAATCCCAAGGTCACCGGCGGCAGCGGCGTCGACCCAACCTACGCCGCGACGTCGACAACGGCCGAACCCCAAGCGGC GAGCCATGCATCGGGCACGTCGCGCACGATCCCTTCCGAGCTTCGCGAACTGCAGCGGACCAAATTCAGGCTCGGCGGCT CCCCGGTGTTTCAGCGCCCGGTCCAGCCGAACAGGGACGGCAGCGGCGTCGGGGTCGTCGTTCCGGAAAACAGCGTCGGC CGGATTCCTCCCGGCGGGGCGGCCAACCTCTGCTATCCGAACATCAGCTCCTGCGTGAGCGTCTCGGCGCTTTCCAGGAA CGGCAGTCTGCGCGGCGTCCACCTGACCACGCCTGAAGGCTTCGAGCAAAAGGACATGGAGACGATGTTCGAGGCGATCG ACGCGAAGAACTGCGCGCAGGTCGTGGTGGCGGGGCCGATCCAGGAGGCCAAGGGGCGCACCGAAAACTCGGAGTTCAAT ACCCGGGCGAACATCACGGCCCGGATCCACAAGCTCGCGCCCGACGCGCAGGTCGGGTTCGTCGAAACCGAAGCGACCGT TCGTCCGCATGACATTTATGTCCGGCACGATCCGCAAACCGCCGACGGCAAGCTGGAGGTTCACGTCGCCCCGTCCGACG TATCGTCGGAAGACGGCGTGAAGACCGGGAGGATTCCGCAGGACGCATCGATACCCGGCCACGCGCACCGCGTCGCCGAC GGCGACATCGTCCAGAGCAGGCAAGGCGGCCTGCGCCGGCTGTTCTCGTTCTCGAAGAACGGGTGA
Upstream 100 bases:
>100_bases GCGCGCTCGCGGATCTCCACGCGAGGCGCGCCGACGCGCCGCGCTCGCCGGCGCCGGCGCGCCCCGCATCGCCCGGCCGG GAGACGCTCATAGCGACTGA
Downstream 100 bases:
>100_bases GCGGCCGCGCGAAAGCGCATGGCCGGCCCGACGGGCGGCGGCCTTGACCGGTTCGGCGAACCTTGCGCGCGCCGTCCACC GCCGCCGCCCGCTCTGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MNPKVTGGSGVDPTYAATSTTAEPQAASHASGTSRTIPSELRELQRTKFRLGGSPVFQRPVQPNRDGSGVGVVVPENSVG RIPPGGAANLCYPNISSCVSVSALSRNGSLRGVHLTTPEGFEQKDMETMFEAIDAKNCAQVVVAGPIQEAKGRTENSEFN TRANITARIHKLAPDAQVGFVETEATVRPHDIYVRHDPQTADGKLEVHVAPSDVSSEDGVKTGRIPQDASIPGHAHRVAD GDIVQSRQGGLRRLFSFSKNG
Sequences:
>Translated_261_residues MNPKVTGGSGVDPTYAATSTTAEPQAASHASGTSRTIPSELRELQRTKFRLGGSPVFQRPVQPNRDGSGVGVVVPENSVG RIPPGGAANLCYPNISSCVSVSALSRNGSLRGVHLTTPEGFEQKDMETMFEAIDAKNCAQVVVAGPIQEAKGRTENSEFN TRANITARIHKLAPDAQVGFVETEATVRPHDIYVRHDPQTADGKLEVHVAPSDVSSEDGVKTGRIPQDASIPGHAHRVAD GDIVQSRQGGLRRLFSFSKNG >Mature_261_residues MNPKVTGGSGVDPTYAATSTTAEPQAASHASGTSRTIPSELRELQRTKFRLGGSPVFQRPVQPNRDGSGVGVVVPENSVG RIPPGGAANLCYPNISSCVSVSALSRNGSLRGVHLTTPEGFEQKDMETMFEAIDAKNCAQVVVAGPIQEAKGRTENSEFN TRANITARIHKLAPDAQVGFVETEATVRPHDIYVRHDPQTADGKLEVHVAPSDVSSEDGVKTGRIPQDASIPGHAHRVAD GDIVQSRQGGLRRLFSFSKNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27657; Mature: 27657
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPKVTGGSGVDPTYAATSTTAEPQAASHASGTSRTIPSELRELQRTKFRLGGSPVFQRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCC VQPNRDGSGVGVVVPENSVGRIPPGGAANLCYPNISSCVSVSALSRNGSLRGVHLTTPEG CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCC FEQKDMETMFEAIDAKNCAQVVVAGPIQEAKGRTENSEFNTRANITARIHKLAPDAQVGF CCHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEE VETEATVRPHDIYVRHDPQTADGKLEVHVAPSDVSSEDGVKTGRIPQDASIPGHAHRVAD EECCCEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC GDIVQSRQGGLRRLFSFSKNG CCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPKVTGGSGVDPTYAATSTTAEPQAASHASGTSRTIPSELRELQRTKFRLGGSPVFQRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCC VQPNRDGSGVGVVVPENSVGRIPPGGAANLCYPNISSCVSVSALSRNGSLRGVHLTTPEG CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCC FEQKDMETMFEAIDAKNCAQVVVAGPIQEAKGRTENSEFNTRANITARIHKLAPDAQVGF CCHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEE VETEATVRPHDIYVRHDPQTADGKLEVHVAPSDVSSEDGVKTGRIPQDASIPGHAHRVAD EECCCEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC GDIVQSRQGGLRRLFSFSKNG CCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA