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The map label for this gene is ychA [C]

Identifier: 126209495

GI number: 126209495

Start: 2268504

End: 2269370

Strand: Reverse

Name: ychA [C]

Synonym: APL_2041

Alternate gene names: 126209495

Gene position: 2269370-2268504 (Counterclockwise)

Preceding gene: 126209496

Following gene: 126209494

Centisome position: 99.78

GC content: 41.18

Gene sequence:

>867_bases
ATGGACGATGTGATTGAAGAATTATTAAAAGAATTAGATCTGCCGAAAGTTGAAATCAGCCCGAAAGAATTACAAAAATA
TTTATATCGTGAAATGGTTCGCTTAACGTTACTGGTGGATGATTCCTTAACCGAACCGCAAGTATTCGGCTTAATGTCGG
CATTAGTGAAAAAAGCACGCTATCAAGTGAATGCCGAATCCGATGCGGACAGAATCCGACAATTGCTTACTTTAGTTTAT
CAGGAATGGGGATTTAACTGTAATTATCAGCAATACTTTCATACGGATAATCTGTTACTCAATAAAGTGATTCGCACGCA
TTCAGGTATGCCGGTTTCGGTTGGCGCAATCGTGCTTTATTTAGCGGCGTCGCTTGATTTACCGATTTATCCGGTTAATT
TCCCGACTCAGTTAATTCTGCGTGCCGAGATGAAAGATGAGAAAGGTAAAACCACCGTACGTTTTATTAATCCGTGGGAC
GGCAGTTTTATGCCGTTGGAATTGCTCGGTAAATGGCTTGAGGGCGAAATCGGTTACGGTACGGAGCTTACCCCTGAATT
ACTCCGCCGAGCAAAACCTTCAGAATTATTGGAACGAGTGGAAACCGTGTTTAAAATGGCACTCACTCGTGAAGGGAAAT
ATGAAGAAACCTTACGTTTAATTGAATATCGTTTAGTATTCAGCCCGGAAGATCCGTATGAAATTCGTGATCGCGGTATG
GTGCTGGCAAGTATGGATTGCTTCCAGGCTGCTTATGAAGATCTCAGTTATTTTATCGATCAATGTCCGGAAGATCCTTC
CGCCGTAATGCTCAAACTCGAAATAAAAGGTTTGGAACAAAAAAGTAAAGAAAGTCGATTACATTAA

Upstream 100 bases:

>100_bases
TCAACAAATTTTCAAACAATATCAATGGGATGAAATTGAGTCATTCCAAGATTACGGCGGTAATGACCGCTTAACTAAAG
CAGTAAGAAAGGCAAAATAA

Downstream 100 bases:

>100_bases
TTTTTAACCTTTAACTTACTTAAAATCCTTTTGGATTAAGGAAATAGAACATGAACAACAAAATCGTAAAAGTCGGCAAT
ATCGAAGTGGCGAATGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MDDVIEELLKELDLPKVEISPKELQKYLYREMVRLTLLVDDSLTEPQVFGLMSALVKKARYQVNAESDADRIRQLLTLVY
QEWGFNCNYQQYFHTDNLLLNKVIRTHSGMPVSVGAIVLYLAASLDLPIYPVNFPTQLILRAEMKDEKGKTTVRFINPWD
GSFMPLELLGKWLEGEIGYGTELTPELLRRAKPSELLERVETVFKMALTREGKYEETLRLIEYRLVFSPEDPYEIRDRGM
VLASMDCFQAAYEDLSYFIDQCPEDPSAVMLKLEIKGLEQKSKESRLH

Sequences:

>Translated_288_residues
MDDVIEELLKELDLPKVEISPKELQKYLYREMVRLTLLVDDSLTEPQVFGLMSALVKKARYQVNAESDADRIRQLLTLVY
QEWGFNCNYQQYFHTDNLLLNKVIRTHSGMPVSVGAIVLYLAASLDLPIYPVNFPTQLILRAEMKDEKGKTTVRFINPWD
GSFMPLELLGKWLEGEIGYGTELTPELLRRAKPSELLERVETVFKMALTREGKYEETLRLIEYRLVFSPEDPYEIRDRGM
VLASMDCFQAAYEDLSYFIDQCPEDPSAVMLKLEIKGLEQKSKESRLH
>Mature_288_residues
MDDVIEELLKELDLPKVEISPKELQKYLYREMVRLTLLVDDSLTEPQVFGLMSALVKKARYQVNAESDADRIRQLLTLVY
QEWGFNCNYQQYFHTDNLLLNKVIRTHSGMPVSVGAIVLYLAASLDLPIYPVNFPTQLILRAEMKDEKGKTTVRFINPWD
GSFMPLELLGKWLEGEIGYGTELTPELLRRAKPSELLERVETVFKMALTREGKYEETLRLIEYRLVFSPEDPYEIRDRGM
VLASMDCFQAAYEDLSYFIDQCPEDPSAVMLKLEIKGLEQKSKESRLH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family [H]

Homologues:

Organism=Escherichia coli, GI1787465, Length=212, Percent_Identity=41.0377358490566, Blast_Score=170, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33401; Mature: 33401

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDVIEELLKELDLPKVEISPKELQKYLYREMVRLTLLVDDSLTEPQVFGLMSALVKKAR
CHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
YQVNAESDADRIRQLLTLVYQEWGFNCNYQQYFHTDNLLLNKVIRTHSGMPVSVGAIVLY
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHH
LAASLDLPIYPVNFPTQLILRAEMKDEKGKTTVRFINPWDGSFMPLELLGKWLEGEIGYG
HHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCC
TELTPELLRRAKPSELLERVETVFKMALTREGKYEETLRLIEYRLVFSPEDPYEIRDRGM
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCHHHHHCCE
VLASMDCFQAAYEDLSYFIDQCPEDPSAVMLKLEIKGLEQKSKESRLH
EEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHCCCC
>Mature Secondary Structure
MDDVIEELLKELDLPKVEISPKELQKYLYREMVRLTLLVDDSLTEPQVFGLMSALVKKAR
CHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
YQVNAESDADRIRQLLTLVYQEWGFNCNYQQYFHTDNLLLNKVIRTHSGMPVSVGAIVLY
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHH
LAASLDLPIYPVNFPTQLILRAEMKDEKGKTTVRFINPWDGSFMPLELLGKWLEGEIGYG
HHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCC
TELTPELLRRAKPSELLERVETVFKMALTREGKYEETLRLIEYRLVFSPEDPYEIRDRGM
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCHHHHHCCE
VLASMDCFQAAYEDLSYFIDQCPEDPSAVMLKLEIKGLEQKSKESRLH
EEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]