| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yieF [H]
Identifier: 126209451
GI number: 126209451
Start: 2223391
End: 2223942
Strand: Direct
Name: yieF [H]
Synonym: APL_1997
Alternate gene names: 126209451
Gene position: 2223391-2223942 (Clockwise)
Preceding gene: 126209450
Following gene: 126209452
Centisome position: 97.75
GC content: 45.83
Gene sequence:
>552_bases ATGACAAAAAAAATCGCAGTATTAGTCGGTAGCGGCAGCACAACTTCCATCAGCCAATTAGTGGCAAATCATCTTAAAAA TATCGCACCGGCAAGTATTCAGTTAAATTTTGTGAATATCGCGGATTTACCGTTATATGATCGTGATTTGGACGAAAACA GCCCGGCGGAATATGTGCGTTTCCGCCAAGAAATTGCGCAAGCGGACGGCTTTTTATTCGTTACGCCGGAACACAACGGC GGAATGTCCACAATGATGAAAAATGCGATTGATGTCGGTTCTCGCCCAATGGGACAAAGTTTATGGCCGAATAAACCGGC AGGTATCGTATCGGTAGCGGCGGGTATGTCCGGCGGTGTACGTGCGGCGGATCAATTACGAGTAGTCGCTTCCGGCGGTT TTATTAATATGCCGGTTGCACCTTTCGCAGCGAATGTCGGCGGTGTATTTAACGGCGTATTAAATGAACAAGGCGAAATC GTTTCTGAATCCGTGGTAGGTATGCTACAAGGCTTTATCAACAGTTACGCTGATTTTATCGCTAAATTCTAA
Upstream 100 bases:
>100_bases ATTTATGATTTATCTCTAGTTATTTAAGCGAATAAGCGTACAATAGCCATCGAAAATTTTATTGGAATCGTTTAAAACTT TATAAGTTAAGGATTTTATT
Downstream 100 bases:
>100_bases GTTATATTTAGTCTTTAATAGAATAAGCGGTTGTTTTGTAAGATTTTTTGCAAAAACAACCGTTTTTTTCTCAATAAAAT TTATTGTTTACTATTATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTKKIAVLVGSGSTTSISQLVANHLKNIAPASIQLNFVNIADLPLYDRDLDENSPAEYVRFRQEIAQADGFLFVTPEHNG GMSTMMKNAIDVGSRPMGQSLWPNKPAGIVSVAAGMSGGVRAADQLRVVASGGFINMPVAPFAANVGGVFNGVLNEQGEI VSESVVGMLQGFINSYADFIAKF
Sequences:
>Translated_183_residues MTKKIAVLVGSGSTTSISQLVANHLKNIAPASIQLNFVNIADLPLYDRDLDENSPAEYVRFRQEIAQADGFLFVTPEHNG GMSTMMKNAIDVGSRPMGQSLWPNKPAGIVSVAAGMSGGVRAADQLRVVASGGFINMPVAPFAANVGGVFNGVLNEQGEI VSESVVGMLQGFINSYADFIAKF >Mature_182_residues TKKIAVLVGSGSTTSISQLVANHLKNIAPASIQLNFVNIADLPLYDRDLDENSPAEYVRFRQEIAQADGFLFVTPEHNGG MSTMMKNAIDVGSRPMGQSLWPNKPAGIVSVAAGMSGGVRAADQLRVVASGGFINMPVAPFAANVGGVFNGVLNEQGEIV SESVVGMLQGFINSYADFIAKF
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=188, Percent_Identity=35.6382978723404, Blast_Score=91, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19319; Mature: 19188
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKIAVLVGSGSTTSISQLVANHLKNIAPASIQLNFVNIADLPLYDRDLDENSPAEYVR CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHH FRQEIAQADGFLFVTPEHNGGMSTMMKNAIDVGSRPMGQSLWPNKPAGIVSVAAGMSGGV HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCC RAADQLRVVASGGFINMPVAPFAANVGGVFNGVLNEQGEIVSESVVGMLQGFINSYADFI CCHHHEEEEECCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AKF HCC >Mature Secondary Structure TKKIAVLVGSGSTTSISQLVANHLKNIAPASIQLNFVNIADLPLYDRDLDENSPAEYVR CCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHH FRQEIAQADGFLFVTPEHNGGMSTMMKNAIDVGSRPMGQSLWPNKPAGIVSVAAGMSGGV HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCC RAADQLRVVASGGFINMPVAPFAANVGGVFNGVLNEQGEIVSESVVGMLQGFINSYADFI CCHHHEEEEECCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AKF HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]