Click here to switch to the map view.

The map label for this gene is tatC [H]

Identifier: 126209441

GI number: 126209441

Start: 2214043

End: 2214615

Strand: Direct

Name: tatC [H]

Synonym: APL_1987

Alternate gene names: 126209441

Gene position: 2214043-2214615 (Clockwise)

Preceding gene: 126209440

Following gene: 126209442

Centisome position: 97.34

GC content: 40.66

Gene sequence:

>573_bases
ATGATTGCAACCAATGTTGCGACACCTTTTTTTACACCGATTAAATTAACCGGTGTTGTAGCGGTATTTTTATCCGTTCC
TTTTATTTTGTATCAAATTTGGGCGTTTGTCGCACCGGCATTATATAAGCATGAAAAACGTTTGATTTATCCTTTATTGG
TATCAAGTACGTTGCTGTTTTATGCGGGTGTAGCTTTCGCTTACTATATCGTATTTCCGCTTGTCTTCGGTTTCTTAACC
AGTACGGCGCCGGAAGGCGTGCAAATGGCGACCGATATCAGTAGTTATTTAGATTTTATCTTAACGATTTTCTTAGCGTT
CGGTATTTGTTTTGAAGTACCTGTTGCGATTATTTTATTATGTTGGTCGGGCGTTACTTCGGCGGACGATTTACGTGCGA
AACGACCTTATATTATTGTCGCGGCGTTTGTTATCGGTATGTTATTAACGCCGCCGGACATATTCTCGCAAACGCTTTTA
GCAATCCCGATGTGTTTGTTGTTTGAAGTCGGATTATTCTTCTCGAAGTTCTATAAACCGAGAGACGAGCAACCGGAAAC
GATCGCCAATTAA

Upstream 100 bases:

>100_bases
TTGTGTGCTGGTGGTTTTTTGTGCTTTGGTTTATTGGGCAAATGATATTTATACTTTGCTTGCCACGCCGCTAACAGAGA
ATTTGCCCGCAGGGGCGACG

Downstream 100 bases:

>100_bases
TCCAACCCGCTTGCAAGCGGGTTATTTTTTATGAAAATTTACCAAATTAGGAAGCAATTATGACTCAATATCTTAACACT
TCATTTCCCACTCGCCGTAT

Product: Sec-independent protein translocase protein tatC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MIATNVATPFFTPIKLTGVVAVFLSVPFILYQIWAFVAPALYKHEKRLIYPLLVSSTLLFYAGVAFAYYIVFPLVFGFLT
STAPEGVQMATDISSYLDFILTIFLAFGICFEVPVAIILLCWSGVTSADDLRAKRPYIIVAAFVIGMLLTPPDIFSQTLL
AIPMCLLFEVGLFFSKFYKPRDEQPETIAN

Sequences:

>Translated_190_residues
MIATNVATPFFTPIKLTGVVAVFLSVPFILYQIWAFVAPALYKHEKRLIYPLLVSSTLLFYAGVAFAYYIVFPLVFGFLT
STAPEGVQMATDISSYLDFILTIFLAFGICFEVPVAIILLCWSGVTSADDLRAKRPYIIVAAFVIGMLLTPPDIFSQTLL
AIPMCLLFEVGLFFSKFYKPRDEQPETIAN
>Mature_190_residues
MIATNVATPFFTPIKLTGVVAVFLSVPFILYQIWAFVAPALYKHEKRLIYPLLVSSTLLFYAGVAFAYYIVFPLVFGFLT
STAPEGVQMATDISSYLDFILTIFLAFGICFEVPVAIILLCWSGVTSADDLRAKRPYIIVAAFVIGMLLTPPDIFSQTLL
AIPMCLLFEVGLFFSKFYKPRDEQPETIAN

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=192, Percent_Identity=69.2708333333333, Blast_Score=285, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 21163; Mature: 21163

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS01218 TATC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATNVATPFFTPIKLTGVVAVFLSVPFILYQIWAFVAPALYKHEKRLIYPLLVSSTLLF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGVAFAYYIVFPLVFGFLTSTAPEGVQMATDISSYLDFILTIFLAFGICFEVPVAIILL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CWSGVTSADDLRAKRPYIIVAAFVIGMLLTPPDIFSQTLLAIPMCLLFEVGLFFSKFYKP
HHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDEQPETIAN
CCCCCCCCCC
>Mature Secondary Structure
MIATNVATPFFTPIKLTGVVAVFLSVPFILYQIWAFVAPALYKHEKRLIYPLLVSSTLLF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGVAFAYYIVFPLVFGFLTSTAPEGVQMATDISSYLDFILTIFLAFGICFEVPVAIILL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CWSGVTSADDLRAKRPYIIVAAFVIGMLLTPPDIFSQTLLAIPMCLLFEVGLFFSKFYKP
HHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDEQPETIAN
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]