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The map label for this gene is 126209388

Identifier: 126209388

GI number: 126209388

Start: 2164766

End: 2165350

Strand: Direct

Name: 126209388

Synonym: APL_1928

Alternate gene names: NA

Gene position: 2164766-2165350 (Clockwise)

Preceding gene: 126209387

Following gene: 126209389

Centisome position: 95.18

GC content: 43.25

Gene sequence:

>585_bases
ATGAAATTATTTGGTCCGATTTATGATAAAACGATGGAATGGTCTAAACACCGTTTTGCCGGTTTTTGGTTGAGTTTCGT
GAGTTTTATCGAGGCGATTTTCTTTCCGATTCCACCGGACGTAATGTTGATTCCGATGTCGATGAGCAAACCGCAAAAGG
CGATGCGTTATGCGATTTATACCACGATTGCTTCGGTACTCGGCGGTATTATCGGCTATTTTATCGGTTTGTATGCGTTT
GAATGGGTACAAGGATTAATTGCCGATTGGGGAATGCAAGCGAATTTCGATAAAGCGAAATCTTGGTTTGAAACTTGGGG
TGTCGCAGTCGTTTTTTTAGCCGGCTTCTCGCCAATTCCTTATAAAGTGTTTACAATCTGTGCAGGCGTAATGCAGATGG
CATTTTTCCCGTTCGTCATTACTGCGGCGATTTCTCGCTTTGCCCGTTTTGCGTTGGTAGCGAAACTGTCGGCGTGGGGC
GGAGAAAAATATGCGGAAAAAATTCGTCGTTCTATCGAATTAATCGGTTGGGGAACGATTGTTGCGGCAGCCTTAGCTTA
TATCGCTTATCAATTATTTAAATAA

Upstream 100 bases:

>100_bases
CCGATTTTTATGCGTTGGCACATAACTATGTCTCCGTTACGCCGATTCAGGCGGATATGACGGCGCACTATTCCATTCAA
GCTCTTAAGGATACTTTTTA

Downstream 100 bases:

>100_bases
AGGATATGACAATGAAGAAATCATTTATTTTATTCCCATTAGCAGTTTCAGTTTCTTTAGCCTTATCGGGCTGTTCGTCT
TCTTCGTCTTCTTCGTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKLFGPIYDKTMEWSKHRFAGFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPQKAMRYAIYTTIASVLGGIIGYFIGLYAF
EWVQGLIADWGMQANFDKAKSWFETWGVAVVFLAGFSPIPYKVFTICAGVMQMAFFPFVITAAISRFARFALVAKLSAWG
GEKYAEKIRRSIELIGWGTIVAAALAYIAYQLFK

Sequences:

>Translated_194_residues
MKLFGPIYDKTMEWSKHRFAGFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPQKAMRYAIYTTIASVLGGIIGYFIGLYAF
EWVQGLIADWGMQANFDKAKSWFETWGVAVVFLAGFSPIPYKVFTICAGVMQMAFFPFVITAAISRFARFALVAKLSAWG
GEKYAEKIRRSIELIGWGTIVAAALAYIAYQLFK
>Mature_194_residues
MKLFGPIYDKTMEWSKHRFAGFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPQKAMRYAIYTTIASVLGGIIGYFIGLYAF
EWVQGLIADWGMQANFDKAKSWFETWGVAVVFLAGFSPIPYKVFTICAGVMQMAFFPFVITAAISRFARFALVAKLSAWG
GEKYAEKIRRSIELIGWGTIVAAALAYIAYQLFK

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21918; Mature: 21918

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFGPIYDKTMEWSKHRFAGFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPQKAMRYAIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHH
TTIASVLGGIIGYFIGLYAFEWVQGLIADWGMQANFDKAKSWFETWGVAVVFLAGFSPIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
YKVFTICAGVMQMAFFPFVITAAISRFARFALVAKLSAWGGEKYAEKIRRSIELIGWGTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VAAALAYIAYQLFK
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKLFGPIYDKTMEWSKHRFAGFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPQKAMRYAIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHH
TTIASVLGGIIGYFIGLYAFEWVQGLIADWGMQANFDKAKSWFETWGVAVVFLAGFSPIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
YKVFTICAGVMQMAFFPFVITAAISRFARFALVAKLSAWGGEKYAEKIRRSIELIGWGTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VAAALAYIAYQLFK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]