| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is merP
Identifier: 126209319
GI number: 126209319
Start: 2089218
End: 2089532
Strand: Direct
Name: merP
Synonym: APL_1857
Alternate gene names: NA
Gene position: 2089218-2089532 (Clockwise)
Preceding gene: 126209318
Following gene: 126209322
Centisome position: 91.85
GC content: 36.19
Gene sequence:
>315_bases ATGAAAAAATTACTGTTTACTTTGCTTTTTTCTGTCGGAATTTCACCGCTTGTTTATGCCAATGAAGCGGTATCAACCAA TAATGTGACAACCGAACAGCAGGTACAAAAAGAAGTAAATTTCTACATTAAAGAAATGACCTGCCAATTATGTATCTATT TGGTTAATAAAGAATTGCGTGCGATTGACGGGGTGATTTCGACCAAAGCGAATATGAAAGAAAGCAAAGTCAAAATTATC GCTAATGAGAATGTATCGGTAGAGCAGATGATTAAAGCGATTGAGAAACTCAGTTATACCGCCGAGCAGATTTAG
Upstream 100 bases:
>100_bases AATATTGTTCTCGCCGAACTTTGATGATTTTGTATTGGATTGCTTTTGCGATTATTCTGTTTTTTCTGAGCTATCCTTTT ATTTTGCCTTGGTTATTAGC
Downstream 100 bases:
>100_bases GTTTTCCACGTACGAGCCGTACGTGGTTATGATCAGCCTGCGGCTGAGTTGAGCCACGCTATGGCTCTGAGTTTTTCACT ACGGAATACACGGATTACTC
Product: MerP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MKKLLFTLLFSVGISPLVYANEAVSTNNVTTEQQVQKEVNFYIKEMTCQLCIYLVNKELRAIDGVISTKANMKESKVKII ANENVSVEQMIKAIEKLSYTAEQI
Sequences:
>Translated_104_residues MKKLLFTLLFSVGISPLVYANEAVSTNNVTTEQQVQKEVNFYIKEMTCQLCIYLVNKELRAIDGVISTKANMKESKVKII ANENVSVEQMIKAIEKLSYTAEQI >Mature_104_residues MKKLLFTLLFSVGISPLVYANEAVSTNNVTTEQQVQKEVNFYIKEMTCQLCIYLVNKELRAIDGVISTKANMKESKVKII ANENVSVEQMIKAIEKLSYTAEQI
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006121 [H]
Pfam domain/function: PF00403 HMA [H]
EC number: NA
Molecular weight: Translated: 11764; Mature: 11764
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLFTLLFSVGISPLVYANEAVSTNNVTTEQQVQKEVNFYIKEMTCQLCIYLVNKELR CHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIDGVISTKANMKESKVKIIANENVSVEQMIKAIEKLSYTAEQI HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLLFTLLFSVGISPLVYANEAVSTNNVTTEQQVQKEVNFYIKEMTCQLCIYLVNKELR CHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIDGVISTKANMKESKVKIIANENVSVEQMIKAIEKLSYTAEQI HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]