| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yceG [C]
Identifier: 126209280
GI number: 126209280
Start: 2040329
End: 2041363
Strand: Reverse
Name: yceG [C]
Synonym: APL_1818
Alternate gene names: 126209280
Gene position: 2041363-2040329 (Counterclockwise)
Preceding gene: 126209281
Following gene: 126209279
Centisome position: 89.75
GC content: 41.84
Gene sequence:
>1035_bases ATGATTAAAAAACTTCTTATTGCTTTAGGCTTATGCGGTCTAATTGCTGCCGGCGGTGCAATTTACGGTTATCAAAAACT CTCCGGTCTTGCCGAGCATCCGCTTACCGCAAAAGCAGATCAATTCTTTATCTTAGAGAAAGGCACATCAAGCCAAAAGC TGGCACAATTATTGGAAGAACAAGGTATTGTTAATCATGATGATGTTAGCCTACTCCCCTATCTTATTCGTTTTAAACCG GAACTGAGTAAATTTAAAGCGGGGACTTACTCACTGAATGGACTTAACACGGTTGAAGATTTGCTGAAACATTTAAGTTC CGGCAAAGAAGTCCAACTTAACGTGCAATTTATCGAAGGTAAAACCTTTAAGGTTTGGCGCGAACAACTTGCGAAAGCAA GTTATATGCAACACACGCTAACCGGAAAATCCGAAGCGGAAATCGCTCAATTGCTCGGTATTGCCCATGAGAAACTCGAG GGCTGGATTGCACCCGATACTTATAGCTATGTGCCGAATTCAAGCGATTTGGAATTACTTAAACGAGCTTATCAAAAGCA ACAAAAAGCATTGGATAACGCTTGGCAAAATCGTGCGGAAAATCTACCGCTTGCAAACCCGTATGAAATGCTGATTTTGG CTTCTATCGTGGAAAAAGAAACCGCAGTTACGAGTGAACGCCCACAAGTAGCATCTGTATTTATCAACCGTCTCAGACTA AAAATGAAACTGCAAACCGACCCGACCGTAATTTACGGTATGGGCGATCGGTATAACGGTAATATTCGTAAAAAAGATTT AGAAGAAGCAACACCTTATAATACTTATGTAATTGACGGCTTACCGCCGACACCGATTGCAATGCCGAGCGAAGCGGCAT TAAAAGCGGTTTCACAACCGGATAATACGCCATATCTCTATTTTGTGGCAGACGGCAGCGGCGGACACAAATTTAGTAAA AATCTAGACCAACACAACCAAGCGGTTCGTGACTGGATCAAAATCGAACGAAACAAAAAACTTGAGAAGAAATAA
Upstream 100 bases:
>100_bases TTTCTTGAAAAAAGCACCGCTTGTTCTCTGTTTATAGTGTAAAATTCATCACGTTTTTATAGCAATTATTCAACAGATTA TTTACAGCGAATTTTATTTA
Downstream 100 bases:
>100_bases GAAATGCGTGGAAAATTTATTGTTCTTGAAGGTTTAGAAGGTGCAGGCAAAACCACTGCACACCAAGTGATTTTAGCTCA GTTGGAAAAAGCGGGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MIKKLLIALGLCGLIAAGGAIYGYQKLSGLAEHPLTAKADQFFILEKGTSSQKLAQLLEEQGIVNHDDVSLLPYLIRFKP ELSKFKAGTYSLNGLNTVEDLLKHLSSGKEVQLNVQFIEGKTFKVWREQLAKASYMQHTLTGKSEAEIAQLLGIAHEKLE GWIAPDTYSYVPNSSDLELLKRAYQKQQKALDNAWQNRAENLPLANPYEMLILASIVEKETAVTSERPQVASVFINRLRL KMKLQTDPTVIYGMGDRYNGNIRKKDLEEATPYNTYVIDGLPPTPIAMPSEAALKAVSQPDNTPYLYFVADGSGGHKFSK NLDQHNQAVRDWIKIERNKKLEKK
Sequences:
>Translated_344_residues MIKKLLIALGLCGLIAAGGAIYGYQKLSGLAEHPLTAKADQFFILEKGTSSQKLAQLLEEQGIVNHDDVSLLPYLIRFKP ELSKFKAGTYSLNGLNTVEDLLKHLSSGKEVQLNVQFIEGKTFKVWREQLAKASYMQHTLTGKSEAEIAQLLGIAHEKLE GWIAPDTYSYVPNSSDLELLKRAYQKQQKALDNAWQNRAENLPLANPYEMLILASIVEKETAVTSERPQVASVFINRLRL KMKLQTDPTVIYGMGDRYNGNIRKKDLEEATPYNTYVIDGLPPTPIAMPSEAALKAVSQPDNTPYLYFVADGSGGHKFSK NLDQHNQAVRDWIKIERNKKLEKK >Mature_344_residues MIKKLLIALGLCGLIAAGGAIYGYQKLSGLAEHPLTAKADQFFILEKGTSSQKLAQLLEEQGIVNHDDVSLLPYLIRFKP ELSKFKAGTYSLNGLNTVEDLLKHLSSGKEVQLNVQFIEGKTFKVWREQLAKASYMQHTLTGKSEAEIAQLLGIAHEKLE GWIAPDTYSYVPNSSDLELLKRAYQKQQKALDNAWQNRAENLPLANPYEMLILASIVEKETAVTSERPQVASVFINRLRL KMKLQTDPTVIYGMGDRYNGNIRKKDLEEATPYNTYVIDGLPPTPIAMPSEAALKAVSQPDNTPYLYFVADGSGGHKFSK NLDQHNQAVRDWIKIERNKKLEKK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=326, Percent_Identity=48.4662576687117, Blast_Score=310, Evalue=8e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38534; Mature: 38534
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKLLIALGLCGLIAAGGAIYGYQKLSGLAEHPLTAKADQFFILEKGTSSQKLAQLLEE CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH QGIVNHDDVSLLPYLIRFKPELSKFKAGTYSLNGLNTVEDLLKHLSSGKEVQLNVQFIEG CCCCCCCCHHHHHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHCCCCEEEEEEEEECC KTFKVWREQLAKASYMQHTLTGKSEAEIAQLLGIAHEKLEGWIAPDTYSYVPNSSDLELL CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH KRAYQKQQKALDNAWQNRAENLPLANPYEMLILASIVEKETAVTSERPQVASVFINRLRL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHE KMKLQTDPTVIYGMGDRYNGNIRKKDLEEATPYNTYVIDGLPPTPIAMPSEAALKAVSQP EEEECCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCC DNTPYLYFVADGSGGHKFSKNLDQHNQAVRDWIKIERNKKLEKK CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIKKLLIALGLCGLIAAGGAIYGYQKLSGLAEHPLTAKADQFFILEKGTSSQKLAQLLEE CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH QGIVNHDDVSLLPYLIRFKPELSKFKAGTYSLNGLNTVEDLLKHLSSGKEVQLNVQFIEG CCCCCCCCHHHHHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHCCCCEEEEEEEEECC KTFKVWREQLAKASYMQHTLTGKSEAEIAQLLGIAHEKLEGWIAPDTYSYVPNSSDLELL CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH KRAYQKQQKALDNAWQNRAENLPLANPYEMLILASIVEKETAVTSERPQVASVFINRLRL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHE KMKLQTDPTVIYGMGDRYNGNIRKKDLEEATPYNTYVIDGLPPTPIAMPSEAALKAVSQP EEEECCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCC DNTPYLYFVADGSGGHKFSKNLDQHNQAVRDWIKIERNKKLEKK CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]