| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209210
Identifier: 126209210
GI number: 126209210
Start: 1982836
End: 1983150
Strand: Reverse
Name: 126209210
Synonym: APL_1746
Alternate gene names: NA
Gene position: 1983150-1982836 (Counterclockwise)
Preceding gene: 126209213
Following gene: 126209209
Centisome position: 87.19
GC content: 38.41
Gene sequence:
>315_bases ATGCAACCGAAGATTTTTATTATTGAGCAAACCCAGATTTTTAGGCATTGGCTTAAAACGCTCAAAAATCCTATTGCACG AATCACGATTGCCAGACGTATTGAAAGAGCCGGTTTTGGAAATTTTGGTGATCATAAAGCACTGGGTGCAGGTTTATGGG AAATGAGAATAGATACCGGTGCAGGTTATCGGATTTATTACGCTCAAAAGGGAGAATGCATTTATTTGTTACTTAATGGC GGAGATAAATCCAGCCAAGCCAAAGACATTAAAAAAGCGAGAACAATATGGACGGAAATACAAAAACACCAATAG
Upstream 100 bases:
>100_bases AAGTAAGTTTCTTTTCTATTAAAACCAAACTAGATCATTAGGATAAAAAATCATTATTGTAATTTTGTATCCAATTAGAT ACTATTTCGAGAGTTAGGCT
Downstream 100 bases:
>100_bases AAACAACACCTTTTGATTTAGCTGAATATTTAGATAGCGAAGAAGCAATTCAAATCTATCTTACTCAAGTTTTAGCTGAT GGTGATAATGCCGAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MQPKIFIIEQTQIFRHWLKTLKNPIARITIARRIERAGFGNFGDHKALGAGLWEMRIDTGAGYRIYYAQKGECIYLLLNG GDKSSQAKDIKKARTIWTEIQKHQ
Sequences:
>Translated_104_residues MQPKIFIIEQTQIFRHWLKTLKNPIARITIARRIERAGFGNFGDHKALGAGLWEMRIDTGAGYRIYYAQKGECIYLLLNG GDKSSQAKDIKKARTIWTEIQKHQ >Mature_104_residues MQPKIFIIEQTQIFRHWLKTLKNPIARITIARRIERAGFGNFGDHKALGAGLWEMRIDTGAGYRIYYAQKGECIYLLLNG GDKSSQAKDIKKARTIWTEIQKHQ
Specific function: Unknown
COG id: COG3657
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014056 - InterPro: IPR009241 [H]
Pfam domain/function: PF05973 Gp49 [H]
EC number: NA
Molecular weight: Translated: 12033; Mature: 12033
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKIFIIEQTQIFRHWLKTLKNPIARITIARRIERAGFGNFGDHKALGAGLWEMRIDTG CCCCEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEECC AGYRIYYAQKGECIYLLLNGGDKSSQAKDIKKARTIWTEIQKHQ CCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPKIFIIEQTQIFRHWLKTLKNPIARITIARRIERAGFGNFGDHKALGAGLWEMRIDTG CCCCEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEECC AGYRIYYAQKGECIYLLLNGGDKSSQAKDIKKARTIWTEIQKHQ CCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]