| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yggX [C]
Identifier: 126209204
GI number: 126209204
Start: 1975571
End: 1975846
Strand: Direct
Name: yggX [C]
Synonym: APL_1740
Alternate gene names: 126209204
Gene position: 1975571-1975846 (Clockwise)
Preceding gene: 126209203
Following gene: 126209205
Centisome position: 86.86
GC content: 36.23
Gene sequence:
>276_bases ATGGCTCGTACTGTATTTTGTGAATATTTAAAGCAAGAAGCCGAAGGCTTAGATTTTCAATTATATCCCGGCGAATTGGG TAAGCGTATTTTTGATTCTATTAGTAAACAAGCGTGGTCGGAATGGATCAAAAAACAAACGATGCTCGTGAACGAGAAAA AATTAAGTATGATGAATGCTGAACACCGTAAATTGCTTGAAACGGAAATGGTGAATTTTTTGTTTGAAGGTAAAGAGGTT CAGATTGAAGGTTATGTTCCTGTCGAACAGAAGTAA
Upstream 100 bases:
>100_bases TGATTTACAATTACCGAGCGAAATAGGTTTGGCAACGCCCGTAAAACGTATTTTGGACGAACTCAGTTTAACGCTAACTA GCACTAATAAGGAATAAAAA
Downstream 100 bases:
>100_bases CAAGGTATTAATTTCTAATGAAAAAATATACTAAATATTTACCGCTACTGTTGATTATTCCGTTTTTAGCCGCTTGCGGC AGTAGTTCTCCTAAAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIKKQTMLVNEKKLSMMNAEHRKLLETEMVNFLFEGKEV QIEGYVPVEQK
Sequences:
>Translated_91_residues MARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIKKQTMLVNEKKLSMMNAEHRKLLETEMVNFLFEGKEV QIEGYVPVEQK >Mature_90_residues ARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIKKQTMLVNEKKLSMMNAEHRKLLETEMVNFLFEGKEVQ IEGYVPVEQK
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family
Homologues:
Organism=Escherichia coli, GI1789332, Length=91, Percent_Identity=74.7252747252747, Blast_Score=150, Evalue=1e-38,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): FETP_ACTP2 (A3N338)
Other databases:
- EMBL: CP000569 - RefSeq: YP_001054429.1 - ProteinModelPortal: A3N338 - SMR: A3N338 - STRING: A3N338 - GeneID: 4848882 - GenomeReviews: CP000569_GR - KEGG: apl:APL_1740 - eggNOG: COG2924 - HOGENOM: HBG289800 - OMA: SKQTMLI - PhylomeDB: A3N338 - ProtClustDB: PRK05408 - BioCyc: APLE416269:APL_1740-MONOMER - HAMAP: MF_00686 - InterPro: IPR007457 - PIRSF: PIRSF029827 - ProDom: PD029191
Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX
EC number: NA
Molecular weight: Translated: 10764; Mature: 10632
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIKKQTMLVNEKKLSMMNA CCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHRKLLETEMVNFLFEGKEVQIEGYVPVEQK HHHHHHHHHHHHHHHCCCEEEEECCCCCCCC >Mature Secondary Structure ARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIKKQTMLVNEKKLSMMNA CHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHRKLLETEMVNFLFEGKEVQIEGYVPVEQK HHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA