| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209188
Identifier: 126209188
GI number: 126209188
Start: 1954021
End: 1954560
Strand: Direct
Name: 126209188
Synonym: APL_1724
Alternate gene names: NA
Gene position: 1954021-1954560 (Clockwise)
Preceding gene: 126209187
Following gene: 126209189
Centisome position: 85.91
GC content: 30.93
Gene sequence:
>540_bases ATGAAATTTAGAAATGTATTAATTGTTATATTATCAGCAATTGTCACTATGGGGAGTACAGAAGCTAAGAAATTATCGGA AGCGTATATTAAAGAGATGTCTAAGCAATTAACAGATGCTAGTGAACGGGGGGACTATAATCAATTTATTAAAATTGCGG AAGATGTAATTGAGGATACTGATGGAGAAATTCAAGAAATTTTACTTAAAGGCACTTTGTATAATTTATATCAAGGTAAG TGTGGTGAGAATGTGCTTAGTAATGGCTTCCCTTATTTTTACAAACCTAGTAATGAGAATAGAGCTAAATGTTTAGCTGT ATTAAATAAAGGGAAAACGATTAATACATTAGAAGAGTTAGTAGAAGATTTAGAAGAATTTATAGCGGCTAATAAAGGTT CTCAGGAACAAATAGTTTGGGCATATACTCAGCTTGTATATTCTGCAGAAACGTTAGAACGAATATATTCTGGTGAAGAT TCTTCTCGATCGGAACGATATAGAAAAATTAAAGAAGAATATGAAGATTTAAGAAAGTAA
Upstream 100 bases:
>100_bases TTGTCCATGAAAATTAAGAAATCTGATCGCCATCAAATTTCTTCAAAGCCATTTAAAATTAAATCTTATTCTGAAGAAGT AAATACATAGGAAAACAACC
Downstream 100 bases:
>100_bases ATTCTAGGTCTTTCAGATTTCTAGCTAAAACATCCCCTTTGTCAAAAATAAAATTCTTTTATATGGAGTAAAAAATGAAT GAACTAGAAAAACTCAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKFRNVLIVILSAIVTMGSTEAKKLSEAYIKEMSKQLTDASERGDYNQFIKIAEDVIEDTDGEIQEILLKGTLYNLYQGK CGENVLSNGFPYFYKPSNENRAKCLAVLNKGKTINTLEELVEDLEEFIAANKGSQEQIVWAYTQLVYSAETLERIYSGED SSRSERYRKIKEEYEDLRK
Sequences:
>Translated_179_residues MKFRNVLIVILSAIVTMGSTEAKKLSEAYIKEMSKQLTDASERGDYNQFIKIAEDVIEDTDGEIQEILLKGTLYNLYQGK CGENVLSNGFPYFYKPSNENRAKCLAVLNKGKTINTLEELVEDLEEFIAANKGSQEQIVWAYTQLVYSAETLERIYSGED SSRSERYRKIKEEYEDLRK >Mature_179_residues MKFRNVLIVILSAIVTMGSTEAKKLSEAYIKEMSKQLTDASERGDYNQFIKIAEDVIEDTDGEIQEILLKGTLYNLYQGK CGENVLSNGFPYFYKPSNENRAKCLAVLNKGKTINTLEELVEDLEEFIAANKGSQEQIVWAYTQLVYSAETLERIYSGED SSRSERYRKIKEEYEDLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20552; Mature: 20552
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRNVLIVILSAIVTMGSTEAKKLSEAYIKEMSKQLTDASERGDYNQFIKIAEDVIEDT CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCC DGEIQEILLKGTLYNLYQGKCGENVLSNGFPYFYKPSNENRAKCLAVLNKGKTINTLEEL CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHH VEDLEEFIAANKGSQEQIVWAYTQLVYSAETLERIYSGEDSSRSERYRKIKEEYEDLRK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFRNVLIVILSAIVTMGSTEAKKLSEAYIKEMSKQLTDASERGDYNQFIKIAEDVIEDT CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCC DGEIQEILLKGTLYNLYQGKCGENVLSNGFPYFYKPSNENRAKCLAVLNKGKTINTLEEL CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHH VEDLEEFIAANKGSQEQIVWAYTQLVYSAETLERIYSGEDSSRSERYRKIKEEYEDLRK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA