Click here to switch to the map view.

The map label for this gene is 126209172

Identifier: 126209172

GI number: 126209172

Start: 1939752

End: 1940381

Strand: Direct

Name: 126209172

Synonym: APL_1708

Alternate gene names: NA

Gene position: 1939752-1940381 (Clockwise)

Preceding gene: 126209171

Following gene: 126209173

Centisome position: 85.28

GC content: 38.73

Gene sequence:

>630_bases
ATGAAATCAATACCTTTTATTCTGTCTGTGCTTCCCACAACGCTTTTAGCGGAAACTATTTCTACACCAAAACCAGTCTT
TTTTGAGGATAAATCCGATCATCTAAAACCGGCGGAATTTGCAAAAAGTTCACCGAATTTAACCGCTGATACCCCGATAT
TTACACCAACCGAACAAGCGAATTTGGATCAAACCATTACCTCTTTATTGATCAATAAACAGTGGAAAGCCTTAAAAATC
GCATTAGAACGTTATGTAAAACAGACGAATTTTGATCCGATTTTATATCGTTATGCAAAAGGAGCGATGTTACGCGCGGA
ACAAGATTATGACGGAGCGATCGAGCTTTACCAACAAATTTTACAGACCCAACCGCAGTTAGCTTATCCACGTTTCGATT
TGGGCGTAATGTTGTTTGAAAATAAACAATATCGTGAAGCGAAACAGCAATTAAACAAAGCAAGAAAATCTCTTGATCCG
CAAATGCAGCCGTTAGTTGAACGTTATTTGCAAGCAATGGCAGAGCGTCAAAATTGGCAACCGGATGCAGAATTGCAATA
TACACAAACCGATAATGTGAATAATGCGTCTAGTGAACGAGAAGTTGAAATCGGGGTTTACGATTCTTAA

Upstream 100 bases:

>100_bases
TATTTGACGGTTGAATTTGCAAAATTTTTTACAAATTAGACCGCTTGCGGACGTACAAGGTGCGTCCCTACGCTAATAAA
AACCTTTCCGATAAAACCTA

Downstream 100 bases:

>100_bases
AAAATGAAGATTCTTTACCGCAAAAAGCCCACGGTTTTCGTTACGGTTTGGGAGCAAGTAGAGAAATAAATCTAAGCGGC
AATCATTTTGTAGCATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKSIPFILSVLPTTLLAETISTPKPVFFEDKSDHLKPAEFAKSSPNLTADTPIFTPTEQANLDQTITSLLINKQWKALKI
ALERYVKQTNFDPILYRYAKGAMLRAEQDYDGAIELYQQILQTQPQLAYPRFDLGVMLFENKQYREAKQQLNKARKSLDP
QMQPLVERYLQAMAERQNWQPDAELQYTQTDNVNNASSEREVEIGVYDS

Sequences:

>Translated_209_residues
MKSIPFILSVLPTTLLAETISTPKPVFFEDKSDHLKPAEFAKSSPNLTADTPIFTPTEQANLDQTITSLLINKQWKALKI
ALERYVKQTNFDPILYRYAKGAMLRAEQDYDGAIELYQQILQTQPQLAYPRFDLGVMLFENKQYREAKQQLNKARKSLDP
QMQPLVERYLQAMAERQNWQPDAELQYTQTDNVNNASSEREVEIGVYDS
>Mature_209_residues
MKSIPFILSVLPTTLLAETISTPKPVFFEDKSDHLKPAEFAKSSPNLTADTPIFTPTEQANLDQTITSLLINKQWKALKI
ALERYVKQTNFDPILYRYAKGAMLRAEQDYDGAIELYQQILQTQPQLAYPRFDLGVMLFENKQYREAKQQLNKARKSLDP
QMQPLVERYLQAMAERQNWQPDAELQYTQTDNVNNASSEREVEIGVYDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007655
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF04575 DUF560 [H]

EC number: NA

Molecular weight: Translated: 24096; Mature: 24096

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIPFILSVLPTTLLAETISTPKPVFFEDKSDHLKPAEFAKSSPNLTADTPIFTPTEQA
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
NLDQTITSLLINKQWKALKIALERYVKQTNFDPILYRYAKGAMLRAEQDYDGAIELYQQI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCCHHHHHHHHH
LQTQPQLAYPRFDLGVMLFENKQYREAKQQLNKARKSLDPQMQPLVERYLQAMAERQNWQ
HHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDAELQYTQTDNVNNASSEREVEIGVYDS
CCCCEEEECCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MKSIPFILSVLPTTLLAETISTPKPVFFEDKSDHLKPAEFAKSSPNLTADTPIFTPTEQA
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
NLDQTITSLLINKQWKALKIALERYVKQTNFDPILYRYAKGAMLRAEQDYDGAIELYQQI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCCHHHHHHHHH
LQTQPQLAYPRFDLGVMLFENKQYREAKQQLNKARKSLDPQMQPLVERYLQAMAERQNWQ
HHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDAELQYTQTDNVNNASSEREVEIGVYDS
CCCCEEEECCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]