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The map label for this gene is tfpB [H]

Identifier: 126209170

GI number: 126209170

Start: 1938143

End: 1938826

Strand: Direct

Name: tfpB [H]

Synonym: APL_1706

Alternate gene names: 126209170

Gene position: 1938143-1938826 (Clockwise)

Preceding gene: 126209168

Following gene: 126209171

Centisome position: 85.21

GC content: 38.74

Gene sequence:

>684_bases
GTGTACTTAGTTGGTCTGCCGCCTTATTCTTACGGCTGGGGACAGGCTTGCTTCTACGGGTTTCCTTTATGGTATGTAGA
TGTCGGAGCCGGAAATGTCGCACGTAGCCTCGGTTACGTGTTTTACGTCACAGCCGTACTTTGTACCACTTACTTAATCG
GCTTATTGTTATTAACCAAAGCCAAACCGTTTCTAAGCGAGTCCTGTATCAAACTTGTTCGCGCCACCATCTTATGTGCG
CTTGCCACTTTACCTATTTTGATTATCAGCACGTTACTTAACGGTAAAATTTATCAACAAGCGGTAATTTCTTATTTCTG
TGCGGTACTCTTATTTATTATCGCATTACGTAACGTGATTAATCGCCATATCAGCAATATCAATATTTATTCGGCAATTC
AATTTTTCCAAAGTCATAAAAGTAACGTACTGATCTTTACTTATGTGTATTTCGTGATCTTTGCCTTTATGGTCGGTTAT
TTACGTCCGCATTTCAAAACACGCTTCGATATGATCGAAATTAATGCCCAAATGTATTATGTGCTCGCCAAATACAACAA
AACCTTTATCTTGTCGAAAGAACTAAAAATAGATAATGATGAATTTTATCTGTATGAACTAAATCCGAATCAGCTTGGTC
ATATCCAAATCGTCGATGCGCATCATCCGTTTGGGTTACAGTAA

Upstream 100 bases:

>100_bases
TAATCCGCAATCTCTTTTTTTGATAGATTTGAGGTTCTGAATTAGATGCTTGGGGTTATCAATAAAATTGTATCTTCTTC
CCTTTCTATGGCTTTTTTAG

Downstream 100 bases:

>100_bases
TCTTGCGCTACGGATATAATCTGACCGGCAAATAAGCCGAAAGAGAAGAAGAAAACAATCCTTATATCATTATAGAAAAG
CCCTTACTTATATAACTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MYLVGLPPYSYGWGQACFYGFPLWYVDVGAGNVARSLGYVFYVTAVLCTTYLIGLLLLTKAKPFLSESCIKLVRATILCA
LATLPILIISTLLNGKIYQQAVISYFCAVLLFIIALRNVINRHISNINIYSAIQFFQSHKSNVLIFTYVYFVIFAFMVGY
LRPHFKTRFDMIEINAQMYYVLAKYNKTFILSKELKIDNDEFYLYELNPNQLGHIQIVDAHHPFGLQ

Sequences:

>Translated_227_residues
MYLVGLPPYSYGWGQACFYGFPLWYVDVGAGNVARSLGYVFYVTAVLCTTYLIGLLLLTKAKPFLSESCIKLVRATILCA
LATLPILIISTLLNGKIYQQAVISYFCAVLLFIIALRNVINRHISNINIYSAIQFFQSHKSNVLIFTYVYFVIFAFMVGY
LRPHFKTRFDMIEINAQMYYVLAKYNKTFILSKELKIDNDEFYLYELNPNQLGHIQIVDAHHPFGLQ
>Mature_227_residues
MYLVGLPPYSYGWGQACFYGFPLWYVDVGAGNVARSLGYVFYVTAVLCTTYLIGLLLLTKAKPFLSESCIKLVRATILCA
LATLPILIISTLLNGKIYQQAVISYFCAVLLFIIALRNVINRHISNINIYSAIQFFQSHKSNVLIFTYVYFVIFAFMVGY
LRPHFKTRFDMIEINAQMYYVLAKYNKTFILSKELKIDNDEFYLYELNPNQLGHIQIVDAHHPFGLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26069; Mature: 26069

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLVGLPPYSYGWGQACFYGFPLWYVDVGAGNVARSLGYVFYVTAVLCTTYLIGLLLLTK
CEEECCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AKPFLSESCIKLVRATILCALATLPILIISTLLNGKIYQQAVISYFCAVLLFIIALRNVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NRHISNINIYSAIQFFQSHKSNVLIFTYVYFVIFAFMVGYLRPHFKTRFDMIEINAQMYY
HHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHEEEECCEEEE
VLAKYNKTFILSKELKIDNDEFYLYELNPNQLGHIQIVDAHHPFGLQ
EEEECCCEEEEEECCEECCCEEEEEEECCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MYLVGLPPYSYGWGQACFYGFPLWYVDVGAGNVARSLGYVFYVTAVLCTTYLIGLLLLTK
CEEECCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AKPFLSESCIKLVRATILCALATLPILIISTLLNGKIYQQAVISYFCAVLLFIIALRNVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NRHISNINIYSAIQFFQSHKSNVLIFTYVYFVIFAFMVGYLRPHFKTRFDMIEINAQMYY
HHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHEEEECCEEEE
VLAKYNKTFILSKELKIDNDEFYLYELNPNQLGHIQIVDAHHPFGLQ
EEEECCCEEEEEECCEECCCEEEEEEECCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2403542; 2061282 [H]