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The map label for this gene is kpsC [H]

Identifier: 126209159

GI number: 126209159

Start: 1925307

End: 1927376

Strand: Direct

Name: kpsC [H]

Synonym: APL_1695

Alternate gene names: 126209159

Gene position: 1925307-1927376 (Clockwise)

Preceding gene: 126209158

Following gene: 126209160

Centisome position: 84.65

GC content: 40.14

Gene sequence:

>2070_bases
GTGGCGCAATGTTCTATCACTAAATCGTTAATTTTCTCACGCGGAATTTTAAAGATCCCTCATTTAAATGCTTTCTTACA
TGATAGTGAGTTAATCTCTTATTCTCGTTTGACCAAAACGATTCGAGCGGATAATGTCATCGGTTGGGGATTACGCCCTT
CTGCGGACAAAGCTCGTGCTTATGCCGAACAACATTATCTTCCTTATATTGCATTAGAAGACGGTTTTTTACGTTCGCTC
GGGCTGGGTGTTATGGGATACCCGCCTTTCTCCGTTGTGTATGATGATGTCGGTATTTATTACGACACGACACGTTCATC
CCGCTTAGAGCAGCTGATTCTCAGTTCGCATTTTAGCGCAACCGATCTTCAACAGGCGGAGCAAGCCGTGCGGCTAATTG
TTCGTCATCAGTTATCAAAATATAACCATAATCTTGATTATGTTTCCAATGAACCGAAAACAAGTGAAATCGTATTAGTC
ATAGATCAAACCTTTGGTGATATGGCGGTAAAATACGGTCGGGCGAATGAATCCGATTTCCAACAAATGCTGGATGCGGC
GATTGGTGAAAATCCCGATGCTCAAATTTGGGTAAAAACGCATCCGGATGTAATTAGCGGAAAGAAAAAAGGTTATTTAA
CCGATTTACATCGTTACGGTAACCGAATTCGTTTATTCGCGGAATACGTTAATCCTATCTCCCTGTTGAGTCGGGTTGAT
AAAGTGTATTGTGTCACTTCACAGATGGGGTTTGAGGCACTGTTATTAGGAAAAAAAGTCGTTACGTTTGGTATTCCTTG
GTTTGCCGGTTGGGGTATTACGGACGATAGACATCCGGATATAGATATTTTAAAACTTGAGCAGCGTCGGAAAAACCGTT
CTTTTATTCAATTATTTGCGGCAGCCTATCTGCAATATAGCCGTTATATTAATCCGTATTCGGGAAAAGTCGGTACGATT
TTTGATGTTATCGATTATCTGAGCAAAGTGAAAATATTGAATCAACGATTAAGCGGTCATCTTTATTGTGTCGGTATGTC
GTTGTGGAAACGAGCCGTGATTAAGCCGTTTTTTAACTTGCCTTTATGCCGATTACATTTTGTCGGCTCATTAAAATCGT
TAGAAAAACGCGTTTTTGAGAAGAATGCGAGATTACTTCTTTGGAGCCAAGGTAAACCGGAAATTCTCGCGTTTGCCGAA
AAACATAATTTACCGCTTTTACGTATGGAAGACGGGTTTATTCGCTCCGTAGGACTCGGTTCTAATTTAGTTGCACCGTT
ATCATTGGTGATTGATGATTTAGGTATTTATTTTAATGCACAAACGCCTTCTCGTTTAGAAGAGATTTTATTGCATCAAG
AATTTAGTGAGCAGGATTTAGTCCTAGCGAAAAAATTACAAACTCGCTTATTAGAAGCAAATATCGGCAAATATAATGTG
GGAAGTGCCGGCTTCCAACTTAATGTCACGGATAAACGTACCATTTTAGTACCCGGTCAGGTGGAAGATGACGCTTCTAT
TCGTTTCGGTTCTCCGGAAATTAAGAAAAATTTGGATTTGTTGCGTAAGGTTAGAGAATTAAATCCTAATGCTTACATTA
TTTATAAACCGCATCCGGATGTAGTTAGCGGTAATCGACAAGGGCATATACCGACCGAACAAGCGGTCGAATTTGCCGAT
GAAATTGTCGAAAACGCCAATATCTTAGACTGCATCAACCAAGTTGATGAAGTACATACGATGACCTCATTAGCCGGTTT
CGAAGCTCTATTACGTGGGAAAATCGTGCATTGTTACGGACTGCCTTTTTATTCAAATTGGGGATTAACCGAAGATTATC
TTTCGCTTGAACGTCGTCACAGAAAGTTATGTTTGGAAGAACTTATTTCGGCGGTACTGGTATATTATCCTCAATATGTC
GATCCGGAAAATGCGACAATGATTAATGCGGAACAAGCGATTGAAATTCTGCAACAACAAAAACAACAGCTATCACATAG
TGGTATTAAACGTCCGTGGATCGCCAAACAGTTTGGTAAATTGAAACAGCTTTATCGCACATTGCAATAA

Upstream 100 bases:

>100_bases
ATCATGGTTTCTTTGCGCTTTTCTTTGGCTCTAAATTTACTTTGCATTCACTAAAAGGTAAACTTAAATTTATATATAGA
AATCAATAAGGTGATTTTGA

Downstream 100 bases:

>100_bases
GAATTTTTAAAGAGTATTACTTATGATTAGTCATTATTTGGATGATTTGATTGAAAATTCGGATCGAATCCTGTTATTAC
AAGGTCCGATAGGCTCTTTT

Product: capsule polysaccharide modification protein LipA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 688

Protein sequence:

>689_residues
MAQCSITKSLIFSRGILKIPHLNAFLHDSELISYSRLTKTIRADNVIGWGLRPSADKARAYAEQHYLPYIALEDGFLRSL
GLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQAVRLIVRHQLSKYNHNLDYVSNEPKTSEIVLV
IDQTFGDMAVKYGRANESDFQQMLDAAIGENPDAQIWVKTHPDVISGKKKGYLTDLHRYGNRIRLFAEYVNPISLLSRVD
KVYCVTSQMGFEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFAAAYLQYSRYINPYSGKVGTI
FDVIDYLSKVKILNQRLSGHLYCVGMSLWKRAVIKPFFNLPLCRLHFVGSLKSLEKRVFEKNARLLLWSQGKPEILAFAE
KHNLPLLRMEDGFIRSVGLGSNLVAPLSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLVLAKKLQTRLLEANIGKYNV
GSAGFQLNVTDKRTILVPGQVEDDASIRFGSPEIKKNLDLLRKVRELNPNAYIIYKPHPDVVSGNRQGHIPTEQAVEFAD
EIVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYGLPFYSNWGLTEDYLSLERRHRKLCLEELISAVLVYYPQYV
DPENATMINAEQAIEILQQQKQQLSHSGIKRPWIAKQFGKLKQLYRTLQ

Sequences:

>Translated_689_residues
MAQCSITKSLIFSRGILKIPHLNAFLHDSELISYSRLTKTIRADNVIGWGLRPSADKARAYAEQHYLPYIALEDGFLRSL
GLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQAVRLIVRHQLSKYNHNLDYVSNEPKTSEIVLV
IDQTFGDMAVKYGRANESDFQQMLDAAIGENPDAQIWVKTHPDVISGKKKGYLTDLHRYGNRIRLFAEYVNPISLLSRVD
KVYCVTSQMGFEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFAAAYLQYSRYINPYSGKVGTI
FDVIDYLSKVKILNQRLSGHLYCVGMSLWKRAVIKPFFNLPLCRLHFVGSLKSLEKRVFEKNARLLLWSQGKPEILAFAE
KHNLPLLRMEDGFIRSVGLGSNLVAPLSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLVLAKKLQTRLLEANIGKYNV
GSAGFQLNVTDKRTILVPGQVEDDASIRFGSPEIKKNLDLLRKVRELNPNAYIIYKPHPDVVSGNRQGHIPTEQAVEFAD
EIVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYGLPFYSNWGLTEDYLSLERRHRKLCLEELISAVLVYYPQYV
DPENATMINAEQAIEILQQQKQQLSHSGIKRPWIAKQFGKLKQLYRTLQ
>Mature_688_residues
AQCSITKSLIFSRGILKIPHLNAFLHDSELISYSRLTKTIRADNVIGWGLRPSADKARAYAEQHYLPYIALEDGFLRSLG
LGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQAVRLIVRHQLSKYNHNLDYVSNEPKTSEIVLVI
DQTFGDMAVKYGRANESDFQQMLDAAIGENPDAQIWVKTHPDVISGKKKGYLTDLHRYGNRIRLFAEYVNPISLLSRVDK
VYCVTSQMGFEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFAAAYLQYSRYINPYSGKVGTIF
DVIDYLSKVKILNQRLSGHLYCVGMSLWKRAVIKPFFNLPLCRLHFVGSLKSLEKRVFEKNARLLLWSQGKPEILAFAEK
HNLPLLRMEDGFIRSVGLGSNLVAPLSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLVLAKKLQTRLLEANIGKYNVG
SAGFQLNVTDKRTILVPGQVEDDASIRFGSPEIKKNLDLLRKVRELNPNAYIIYKPHPDVVSGNRQGHIPTEQAVEFADE
IVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYGLPFYSNWGLTEDYLSLERRHRKLCLEELISAVLVYYPQYVD
PENATMINAEQAIEILQQQKQQLSHSGIKRPWIAKQFGKLKQLYRTLQ

Specific function: Involved in the phospholipid modification of the capsular polysaccharide, a strong requirement for its translocation to the cell surface [H]

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 78517; Mature: 78386

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQCSITKSLIFSRGILKIPHLNAFLHDSELISYSRLTKTIRADNVIGWGLRPSADKARA
CCCCHHHHHHHHHCCCEECCCCHHHHCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHH
YAEQHYLPYIALEDGFLRSLGLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSA
HHHHHCCCEEEECCCHHHHHCCCCCCCCCHHEEEECCCEEEECCHHHHHHHHHHHCCCCH
TDLQQAEQAVRLIVRHQLSKYNHNLDYVSNEPKTSEIVLVIDQTFGDMAVKYGRANESDF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHH
QQMLDAAIGENPDAQIWVKTHPDVISGKKKGYLTDLHRYGNRIRLFAEYVNPISLLSRVD
HHHHHHHHCCCCCCEEEEEECCHHHCCCCCCHHHHHHHCCCCEEHHHHHHCHHHHHHHHH
KVYCVTSQMGFEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFA
HHEEEECCCCHHHHHHCCHHHEECCCHHCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHHH
AAYLQYSRYINPYSGKVGTIFDVIDYLSKVKILNQRLSGHLYCVGMSLWKRAVIKPFFNL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCC
PLCRLHFVGSLKSLEKRVFEKNARLLLWSQGKPEILAFAEKHNLPLLRMEDGFIRSVGLG
CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEHHCCCCEEEECCCCEEECCCC
SNLVAPLSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLVLAKKLQTRLLEANIGKYNV
CCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEC
GSAGFQLNVTDKRTILVPGQVEDDASIRFGSPEIKKNLDLLRKVRELNPNAYIIYKPHPD
CCCCEEEEECCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
VVSGNRQGHIPTEQAVEFADEIVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYG
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
LPFYSNWGLTEDYLSLERRHRKLCLEELISAVLVYYPQYVDPENATMINAEQAIEILQQQ
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHH
KQQLSHSGIKRPWIAKQFGKLKQLYRTLQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQCSITKSLIFSRGILKIPHLNAFLHDSELISYSRLTKTIRADNVIGWGLRPSADKARA
CCCHHHHHHHHHCCCEECCCCHHHHCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHH
YAEQHYLPYIALEDGFLRSLGLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSA
HHHHHCCCEEEECCCHHHHHCCCCCCCCCHHEEEECCCEEEECCHHHHHHHHHHHCCCCH
TDLQQAEQAVRLIVRHQLSKYNHNLDYVSNEPKTSEIVLVIDQTFGDMAVKYGRANESDF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHH
QQMLDAAIGENPDAQIWVKTHPDVISGKKKGYLTDLHRYGNRIRLFAEYVNPISLLSRVD
HHHHHHHHCCCCCCEEEEEECCHHHCCCCCCHHHHHHHCCCCEEHHHHHHCHHHHHHHHH
KVYCVTSQMGFEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFA
HHEEEECCCCHHHHHHCCHHHEECCCHHCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHHH
AAYLQYSRYINPYSGKVGTIFDVIDYLSKVKILNQRLSGHLYCVGMSLWKRAVIKPFFNL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCC
PLCRLHFVGSLKSLEKRVFEKNARLLLWSQGKPEILAFAEKHNLPLLRMEDGFIRSVGLG
CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEHHCCCCEEEECCCCEEECCCC
SNLVAPLSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLVLAKKLQTRLLEANIGKYNV
CCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEC
GSAGFQLNVTDKRTILVPGQVEDDASIRFGSPEIKKNLDLLRKVRELNPNAYIIYKPHPD
CCCCEEEEECCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
VVSGNRQGHIPTEQAVEFADEIVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYG
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
LPFYSNWGLTEDYLSLERRHRKLCLEELISAVLVYYPQYVDPENATMINAEQAIEILQQQ
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHH
KQQLSHSGIKRPWIAKQFGKLKQLYRTLQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]