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The map label for this gene is dmsC [H]

Identifier: 126209140

GI number: 126209140

Start: 1903138

End: 1903971

Strand: Direct

Name: dmsC [H]

Synonym: APL_1676

Alternate gene names: 126209140

Gene position: 1903138-1903971 (Clockwise)

Preceding gene: 126209139

Following gene: 126209141

Centisome position: 83.67

GC content: 42.57

Gene sequence:

>834_bases
ATGAATGCAGGATTACATGAATTACCGTTGGTTTTCTTTACGGTGTTAGCTCAAACGGCGGTCGGATTTTGGCTGATTTT
TACCTTTGTAATGTGCAAAGGCGTTAGCCAGAAGAGCCAAGGTTACTTACATAAAGGATTATTTGTCGCATTGTTATTAT
TAGCTTGTGGCTTTATTGCGTCCGTAATGCACTTAGGTTCGCCGTTCAGAGCATTTAACTCATTAAATCGCGTCGGCAGT
TCTATGATGAGTAATGAAATTGCCAGCGGTGCGGTATTCTTCGCCTTAGCCGGTGGATATTGGTTATTAGCCGTATTAGG
CAAAATGCCGCAAGGGTTAAGCAAGGTGTGGTTGGTGATTACTGCATTAGTAGGTGTTGTATTTATGTATATGATGAATA
ACCTTTATCATCTGCCGACCGTGCCGACTTGGAATAATGCACTTACTTCTTGGCAATTCTACTTAACTGTTGTACTTGGC
GGTTGTGCATTAGCGATGGCAGTATTAAGCACAAATCCGCATCAGGATTATCAAGTGAAATGTAGCCCTTGGTTATATGT
GCTAGCGGTATTCTGTGTAGCGGTGGTCGTTATTTACCAAGCGTTTGGATTAGCACATATCTATAGCTCGGTACAACAAG
CGGTCAATTTAGTGCCGGATTTTGCCATTATGCAAGTGTTACGCCTCTGTTTGTTAGCGGTGGCAGCGGCATTGATTGTA
AAAGGTAGAACATTGCCGTTACTTTCTCTCGCCGTACTTATCACGTTAGCGGCTGAAATGATTGGTCGAGTATTATTCTA
CGGTTTACATATGACCTCAGGAATGGCGGTATAA

Upstream 100 bases:

>100_bases
GCGGATTTAACCAAACCGAATTTAGTGGTGAAAGCCAATAAACACGCACGTCCAAGTGGCGATACAACGGGGTTTTTAGC
TAACCCAAGAGAGGTGTAAG

Downstream 100 bases:

>100_bases
CCTAAAATATAATGGTGGGGAAACCCACCGTTATGCGATAAATAAGGAAAATAAAATGCAAAACGAATTACAACAATGGA
TTTCTATCAGCGGAAGATTA

Product: anaerobic dimethyl sulfoxide reductase chain C

Products: NA

Alternate protein names: DMSO reductase anchor subunit [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNAGLHELPLVFFTVLAQTAVGFWLIFTFVMCKGVSQKSQGYLHKGLFVALLLLACGFIASVMHLGSPFRAFNSLNRVGS
SMMSNEIASGAVFFALAGGYWLLAVLGKMPQGLSKVWLVITALVGVVFMYMMNNLYHLPTVPTWNNALTSWQFYLTVVLG
GCALAMAVLSTNPHQDYQVKCSPWLYVLAVFCVAVVVIYQAFGLAHIYSSVQQAVNLVPDFAIMQVLRLCLLAVAAALIV
KGRTLPLLSLAVLITLAAEMIGRVLFYGLHMTSGMAV

Sequences:

>Translated_277_residues
MNAGLHELPLVFFTVLAQTAVGFWLIFTFVMCKGVSQKSQGYLHKGLFVALLLLACGFIASVMHLGSPFRAFNSLNRVGS
SMMSNEIASGAVFFALAGGYWLLAVLGKMPQGLSKVWLVITALVGVVFMYMMNNLYHLPTVPTWNNALTSWQFYLTVVLG
GCALAMAVLSTNPHQDYQVKCSPWLYVLAVFCVAVVVIYQAFGLAHIYSSVQQAVNLVPDFAIMQVLRLCLLAVAAALIV
KGRTLPLLSLAVLITLAAEMIGRVLFYGLHMTSGMAV
>Mature_277_residues
MNAGLHELPLVFFTVLAQTAVGFWLIFTFVMCKGVSQKSQGYLHKGLFVALLLLACGFIASVMHLGSPFRAFNSLNRVGS
SMMSNEIASGAVFFALAGGYWLLAVLGKMPQGLSKVWLVITALVGVVFMYMMNNLYHLPTVPTWNNALTSWQFYLTVVLG
GCALAMAVLSTNPHQDYQVKCSPWLYVLAVFCVAVVVIYQAFGLAHIYSSVQQAVNLVPDFAIMQVLRLCLLAVAAALIV
KGRTLPLLSLAVLITLAAEMIGRVLFYGLHMTSGMAV

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. DmsC anchors the dmsAB dimer to the membrane and stabilizes it [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787873, Length=290, Percent_Identity=45.1724137931035, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI1787123, Length=285, Percent_Identity=44.9122807017544, Blast_Score=207, Evalue=9e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 30081; Mature: 30081

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8635740 [H]