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The map label for this gene is cbiK

Identifier: 126209088

GI number: 126209088

Start: 1847055

End: 1847741

Strand: Reverse

Name: cbiK

Synonym: APL_1624

Alternate gene names: NA

Gene position: 1847741-1847055 (Counterclockwise)

Preceding gene: 126209090

Following gene: 126209087

Centisome position: 81.24

GC content: 39.74

Gene sequence:

>687_bases
ATGAAATTTACAAAAATAACAATGCTATTAAGCGGTCTTTTTATCTCTTCGTTGGTTCAGGCGCATAATGTATGGTTAGA
GCCGACAAAGAATAAAGATGAATATGTGGTAAAATTCGGGCATGAAACCACGGAAAGTTATCCGGAACATAAATTAAAAT
CCATTCAGTTACTTAAAAGCGACGGTTCTCTCGAAGCTGCAACCTACCAATTCCAAAACGGCGAAGCTTATTTTAAAGCG
GATGTTTATCCTATCGTTTTCCTCCAATTTGATAACGGCGTATGGTCAAAATTACCTAGCGGTAAATATATCGAAAAAAC
TAAAAAAGAAGCGCCTAGCGCCGTATTAAGCCTCAATCCGGTTAAACTCGGCAAAGCGATTTTAACTTGGAACGAACAAG
CGACTAAATCGCATAATATGGATTACGAATTAGTACCTCAAGCCAAACCGGAAGCGGGTAAGCCGTTATCCGTTTTAGTC
TTACATAAAGGAAAACCGGTTTCCGGCATTAAAGTCGGCAGCGGTGAAGATAAGCCGTTTGAGCTTACGAATGCACAAGG
TATCGCTCAATTTACCCCTGTTGCGGGATTTAATAAAGTTTGGGCGGAATTTGAAGAAAAAGGGGTTGAACATCCGGATT
ATACCGAACGTTCAATTGAATATATGCTGACGTTTGATGTGAAATGA

Upstream 100 bases:

>100_bases
AGCATTATGGCTATTTATTTGAACGCTCACTAAAATTGTTATAGACTGAATAAAGCGGAAAACGCCGATATTTTAAGAAA
TTCAAAAGGAGTATTTTGTG

Downstream 100 bases:

>100_bases
TGAAAGTCGTTCGATATTTATTGGTCCTCGTTTTATCGCTGTTTTCATTTCAAGCAATAGCGCATAATTTGTATCTTTTT
GCACAATATGACGGCGATGA

Product: putative periplasmic binding protein CbiK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKFTKITMLLSGLFISSLVQAHNVWLEPTKNKDEYVVKFGHETTESYPEHKLKSIQLLKSDGSLEAATYQFQNGEAYFKA
DVYPIVFLQFDNGVWSKLPSGKYIEKTKKEAPSAVLSLNPVKLGKAILTWNEQATKSHNMDYELVPQAKPEAGKPLSVLV
LHKGKPVSGIKVGSGEDKPFELTNAQGIAQFTPVAGFNKVWAEFEEKGVEHPDYTERSIEYMLTFDVK

Sequences:

>Translated_228_residues
MKFTKITMLLSGLFISSLVQAHNVWLEPTKNKDEYVVKFGHETTESYPEHKLKSIQLLKSDGSLEAATYQFQNGEAYFKA
DVYPIVFLQFDNGVWSKLPSGKYIEKTKKEAPSAVLSLNPVKLGKAILTWNEQATKSHNMDYELVPQAKPEAGKPLSVLV
LHKGKPVSGIKVGSGEDKPFELTNAQGIAQFTPVAGFNKVWAEFEEKGVEHPDYTERSIEYMLTFDVK
>Mature_228_residues
MKFTKITMLLSGLFISSLVQAHNVWLEPTKNKDEYVVKFGHETTESYPEHKLKSIQLLKSDGSLEAATYQFQNGEAYFKA
DVYPIVFLQFDNGVWSKLPSGKYIEKTKKEAPSAVLSLNPVKLGKAILTWNEQATKSHNMDYELVPQAKPEAGKPLSVLV
LHKGKPVSGIKVGSGEDKPFELTNAQGIAQFTPVAGFNKVWAEFEEKGVEHPDYTERSIEYMLTFDVK

Specific function: Unknown

COG id: COG5266

COG function: function code P; ABC-type Co2+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019613 [H]

Pfam domain/function: PF10670 NikM [H]

EC number: NA

Molecular weight: Translated: 25588; Mature: 25588

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTKITMLLSGLFISSLVQAHNVWLEPTKNKDEYVVKFGHETTESYPEHKLKSIQLLKS
CCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHEEEEEC
DGSLEAATYQFQNGEAYFKADVYPIVFLQFDNGVWSKLPSGKYIEKTKKEAPSAVLSLNP
CCCEEEEEEEEECCCEEEEECCEEEEEEEECCCHHHCCCCCCHHHHHHHHCCCEEEEECC
VKLGKAILTWNEQATKSHNMDYELVPQAKPEAGKPLSVLVLHKGKPVSGIKVGSGEDKPF
HHHCCEEEEECCHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCE
ELTNAQGIAQFTPVAGFNKVWAEFEEKGVEHPDYTERSIEYMLTFDVK
EECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKFTKITMLLSGLFISSLVQAHNVWLEPTKNKDEYVVKFGHETTESYPEHKLKSIQLLKS
CCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHEEEEEC
DGSLEAATYQFQNGEAYFKADVYPIVFLQFDNGVWSKLPSGKYIEKTKKEAPSAVLSLNP
CCCEEEEEEEEECCCEEEEECCEEEEEEEECCCHHHCCCCCCHHHHHHHHCCCEEEEECC
VKLGKAILTWNEQATKSHNMDYELVPQAKPEAGKPLSVLVLHKGKPVSGIKVGSGEDKPF
HHHCCEEEEECCHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCE
ELTNAQGIAQFTPVAGFNKVWAEFEEKGVEHPDYTERSIEYMLTFDVK
EECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]