| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is cpxC [H]
Identifier: 126209047
GI number: 126209047
Start: 1810436
End: 1811593
Strand: Direct
Name: cpxC [H]
Synonym: APL_1583
Alternate gene names: 126209047
Gene position: 1810436-1811593 (Clockwise)
Preceding gene: 126209046
Following gene: 126209048
Centisome position: 79.6
GC content: 38.26
Gene sequence:
>1158_bases ATGGAAACAACTATTACGGCAAGTCCGACAGAAAAACTACAAAAACCGGTTAAACAGAAAAAAAGTTGGTTAAAAAAGCT TAATCCGTTATTTTGGGTAACTGTAGCGATTCCTACGGTATTATCAGCCTTTTATTTCGGTTCTGTTGCTTCCGATATTT ATATTTCGGAATCAAGCTTCGTTGTAAGATCTCCTCAAAATCAGACCGCTTTAACCGGTGTCGGTGCCTTATTACAAGGT TCCGGATTTTCTCGAGCTCAAGATGATACTTATACCGTACAAGAATATATGCATTCTCGTACGGCACTAGAACAGTTAAT GAAAGACTTGCCAATACGTGAATACTATGAGAATCAAGGCGATATTATCGCTCGCTTTAATGGATTTGGTTTAAATAATA GTAAAGAAGCGTTTTATAAATATTTCCGAGATCGCTTAAGTGTGGACTTTGACTCTGTTTCCGGTATCGCCAGCTTACGT ATTCGAGCATTTAACGCGGAAGAGGGGCAACAAATTAATCAAAAATTACTTGCCGAAGGTGAAACGCTTATTAACCGTTT AAACGAACGTGCAAGAAAAGATACCATTTCATTTGCGGAACAAGCGGTTACAGAAGCGGAAAATAATGTAAACGAAACGG CAAATGCTTTAAGTAAATACCGTATCAAAAATAAAATCTTTGATTTACCGGCACAATCCGGCGTACAACTTTCATTAATT TCCAGCCTAAAAAGCGAATTGATTCGTGTAGAAACACAATTGGCTCAATTGCAATCTATTACACCGGACAACCCACAAGT TGATGCATTGCTTATGCGCCAAAAAAGTTTACGTAAGGAAATCGATGAGCAATCAAAACAGCTTTCCAGTAACAGTAATA GCTCTATTGCTATTCAAACTGCCGATTACCAACGCTTAGTACTTGCAAACGAGCTGGCACAGCAACAATTGACCGCAGCA TTAACCTCATTACAAAATACGAAAAATGAAGCGGATCGCCAGCAACTTTATTTAGAAGTAATCAGTCAGCCAAGCAAACC GGACTGGGCGGAAGAGCCTTATCGCTTATATAATATTTTAGCGACATTCTTTATCGGTCTGATGCTTTATGGTGTATTAA GTTTATTAATTGCAAGCGTAAGAGAGCACAAAAACTAA
Upstream 100 bases:
>100_bases CAAAAATTCTTGAGAATGATTTTCTCGATTACTTCGCCGGTTACAAGTACGACTAATGCTATTCGTGCCTATTAATATAT TGAATTTATAAGGATAAAAT
Downstream 100 bases:
>100_bases TGCAATACGGTGATCAAACAACTTTCCGCCAATCTCTCGCCATTCAAGGGAGAGTAATCGGTGCATTACTCATGCGGGAA ATTATTACGCGTTACGGACG
Product: capsule polysaccharide export inner-membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues METTITASPTEKLQKPVKQKKSWLKKLNPLFWVTVAIPTVLSAFYFGSVASDIYISESSFVVRSPQNQTALTGVGALLQG SGFSRAQDDTYTVQEYMHSRTALEQLMKDLPIREYYENQGDIIARFNGFGLNNSKEAFYKYFRDRLSVDFDSVSGIASLR IRAFNAEEGQQINQKLLAEGETLINRLNERARKDTISFAEQAVTEAENNVNETANALSKYRIKNKIFDLPAQSGVQLSLI SSLKSELIRVETQLAQLQSITPDNPQVDALLMRQKSLRKEIDEQSKQLSSNSNSSIAIQTADYQRLVLANELAQQQLTAA LTSLQNTKNEADRQQLYLEVISQPSKPDWAEEPYRLYNILATFFIGLMLYGVLSLLIASVREHKN
Sequences:
>Translated_385_residues METTITASPTEKLQKPVKQKKSWLKKLNPLFWVTVAIPTVLSAFYFGSVASDIYISESSFVVRSPQNQTALTGVGALLQG SGFSRAQDDTYTVQEYMHSRTALEQLMKDLPIREYYENQGDIIARFNGFGLNNSKEAFYKYFRDRLSVDFDSVSGIASLR IRAFNAEEGQQINQKLLAEGETLINRLNERARKDTISFAEQAVTEAENNVNETANALSKYRIKNKIFDLPAQSGVQLSLI SSLKSELIRVETQLAQLQSITPDNPQVDALLMRQKSLRKEIDEQSKQLSSNSNSSIAIQTADYQRLVLANELAQQQLTAA LTSLQNTKNEADRQQLYLEVISQPSKPDWAEEPYRLYNILATFFIGLMLYGVLSLLIASVREHKN >Mature_385_residues METTITASPTEKLQKPVKQKKSWLKKLNPLFWVTVAIPTVLSAFYFGSVASDIYISESSFVVRSPQNQTALTGVGALLQG SGFSRAQDDTYTVQEYMHSRTALEQLMKDLPIREYYENQGDIIARFNGFGLNNSKEAFYKYFRDRLSVDFDSVSGIASLR IRAFNAEEGQQINQKLLAEGETLINRLNERARKDTISFAEQAVTEAENNVNETANALSKYRIKNKIFDLPAQSGVQLSLI SSLKSELIRVETQLAQLQSITPDNPQVDALLMRQKSLRKEIDEQSKQLSSNSNSSIAIQTADYQRLVLANELAQQQLTAA LTSLQNTKNEADRQQLYLEVISQPSKPDWAEEPYRLYNILATFFIGLMLYGVLSLLIASVREHKN
Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexD proteins [H]
COG id: COG3524
COG function: function code M; Capsule polysaccharide export protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BexC/CtrB/KpsE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005705 - InterPro: IPR003856 [H]
Pfam domain/function: PF02706 Wzz [H]
EC number: NA
Molecular weight: Translated: 43414; Mature: 43414
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTITASPTEKLQKPVKQKKSWLKKLNPLFWVTVAIPTVLSAFYFGSVASDIYISESSF CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCE VVRSPQNQTALTGVGALLQGSGFSRAQDDTYTVQEYMHSRTALEQLMKDLPIREYYENQG EEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC DIIARFNGFGLNNSKEAFYKYFRDRLSVDFDSVSGIASLRIRAFNAEEGQQINQKLLAEG CEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHEEEECCHHHHHHHHHHHHHH ETLINRLNERARKDTISFAEQAVTEAENNVNETANALSKYRIKNKIFDLPAQSGVQLSLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH SSLKSELIRVETQLAQLQSITPDNPQVDALLMRQKSLRKEIDEQSKQLSSNSNSSIAIQT HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE ADYQRLVLANELAQQQLTAALTSLQNTKNEADRQQLYLEVISQPSKPDWAEEPYRLYNIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH ATFFIGLMLYGVLSLLIASVREHKN HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure METTITASPTEKLQKPVKQKKSWLKKLNPLFWVTVAIPTVLSAFYFGSVASDIYISESSF CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCE VVRSPQNQTALTGVGALLQGSGFSRAQDDTYTVQEYMHSRTALEQLMKDLPIREYYENQG EEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC DIIARFNGFGLNNSKEAFYKYFRDRLSVDFDSVSGIASLRIRAFNAEEGQQINQKLLAEG CEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHEEEECCHHHHHHHHHHHHHH ETLINRLNERARKDTISFAEQAVTEAENNVNETANALSKYRIKNKIFDLPAQSGVQLSLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH SSLKSELIRVETQLAQLQSITPDNPQVDALLMRQKSLRKEIDEQSKQLSSNSNSSIAIQT HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE ADYQRLVLANELAQQQLTAALTSLQNTKNEADRQQLYLEVISQPSKPDWAEEPYRLYNIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH ATFFIGLMLYGVLSLLIASVREHKN HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2082145 [H]