Click here to switch to the map view.

The map label for this gene is glfT1 [H]

Identifier: 126208933

GI number: 126208933

Start: 1681443

End: 1682366

Strand: Direct

Name: glfT1 [H]

Synonym: APL_1469

Alternate gene names: 126208933

Gene position: 1681443-1682366 (Clockwise)

Preceding gene: 126208932

Following gene: 126208934

Centisome position: 73.93

GC content: 33.77

Gene sequence:

>924_bases
ATGATTATAGAAAAATCCATTTGTGCCGTTGTAGTGACTTACAACCGAAAAGATTTATTATTAAATTGTTTACAAGCTTT
GCAAGCTCAAAGTTATCCACCTTCTCATATCGTCGTGGTTAATAATACCAGTACAGATGGGACGGTGGATTTTTTACGGG
ATAACGGCTGGTCGGATAACAATCGCTTCACTCTTTTAACACTTGACGGTAATCAAGGCGGGGCGGGCGGATTTTATGCC
GGTATTGAGTTTGCTTATCAGCGTAAGTTCGATTATATCTGGTTAATGGATGATGACGGTTTACCGGCTAAAGACAGCCT
ATCCGAGTTAATTCCTTATGCGAATGAAAATACTTATATCGGTCCTTTAGTATTAAATAATAAGAATCTTGAAGAACTTA
CGTTTACGTTACGTTTACCGAATAGTAAAAAGGTTTTAACGACTTTGGCGGATGTAGAAAAAGCGACGCAAGATAATATT
ATTCCTGATATTGTGATGCCGTTTAACGGTATTTTATTTTCGAGAAAGATGGTAGAGGAAATAGGCTTCCCTAAAGCTGA
TTATTTTATTTGGGGAGATGATATGGAATATACCTGGCGGGCTAAAAAAGCAGGATTCAAGATATTTACCGTAGTTTCTT
CTAAATTTTATCATCCGAAAGAATTAACATTAGGCACGTCGATGTTTTTTAATTTATTAAAATTTAATGATACCGAATCG
AAATTAAAACTTTATTGTATGTGCCGAAATAATATTCGTAATCTTTTGGATTATAAAGGAAGTTTAATTTCAGTCTTATT
TTGTATTAAAGTATGTTGGTTTTTCCTATTTACTAAGCCGAATATAACTAAATTAAAAATCGGTATAAGAGGCATTTGGC
ATGGTTTAACAAAGAATTTTTCCCATCATAGAGAATACTTATAA

Upstream 100 bases:

>100_bases
TTTTTTATCCTTGGGAATTACAAATATGGGATAAGAAAGATGCGGAAAAAAATATTCAGAGTCATATAAAATATAAACGT
AATTTTGTGAATAACATAAA

Downstream 100 bases:

>100_bases
AAATTATGAGCAGAGTTAAAATTCTAATTGCAACCCATAAAAACTATGAATTTCCTAATACGGTTTGTTATGTGCCGATT
TATGTCGGAAAAGCATTACA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: GalTr; Beta-D-(1-5)galactofuranosyltransferase; Beta-D-(1-6)galactofuranosyltransferase; UDP-Galf:alpha-3-L-rhamnosyl-alpha-D-GlcNAc-pyrophosphate polyprenol, UDP-galactofuranosyl transferase [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MIIEKSICAVVVTYNRKDLLLNCLQALQAQSYPPSHIVVVNNTSTDGTVDFLRDNGWSDNNRFTLLTLDGNQGGAGGFYA
GIEFAYQRKFDYIWLMDDDGLPAKDSLSELIPYANENTYIGPLVLNNKNLEELTFTLRLPNSKKVLTTLADVEKATQDNI
IPDIVMPFNGILFSRKMVEEIGFPKADYFIWGDDMEYTWRAKKAGFKIFTVVSSKFYHPKELTLGTSMFFNLLKFNDTES
KLKLYCMCRNNIRNLLDYKGSLISVLFCIKVCWFFLFTKPNITKLKIGIRGIWHGLTKNFSHHREYL

Sequences:

>Translated_307_residues
MIIEKSICAVVVTYNRKDLLLNCLQALQAQSYPPSHIVVVNNTSTDGTVDFLRDNGWSDNNRFTLLTLDGNQGGAGGFYA
GIEFAYQRKFDYIWLMDDDGLPAKDSLSELIPYANENTYIGPLVLNNKNLEELTFTLRLPNSKKVLTTLADVEKATQDNI
IPDIVMPFNGILFSRKMVEEIGFPKADYFIWGDDMEYTWRAKKAGFKIFTVVSSKFYHPKELTLGTSMFFNLLKFNDTES
KLKLYCMCRNNIRNLLDYKGSLISVLFCIKVCWFFLFTKPNITKLKIGIRGIWHGLTKNFSHHREYL
>Mature_307_residues
MIIEKSICAVVVTYNRKDLLLNCLQALQAQSYPPSHIVVVNNTSTDGTVDFLRDNGWSDNNRFTLLTLDGNQGGAGGFYA
GIEFAYQRKFDYIWLMDDDGLPAKDSLSELIPYANENTYIGPLVLNNKNLEELTFTLRLPNSKKVLTTLADVEKATQDNI
IPDIVMPFNGILFSRKMVEEIGFPKADYFIWGDDMEYTWRAKKAGFKIFTVVSSKFYHPKELTLGTSMFFNLLKFNDTES
KLKLYCMCRNNIRNLLDYKGSLISVLFCIKVCWFFLFTKPNITKLKIGIRGIWHGLTKNFSHHREYL

Specific function: Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. It catalyzes the transfer of the first galactofuranosyl (Galf) unit from UDP- g

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 35264; Mature: 35264

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIEKSICAVVVTYNRKDLLLNCLQALQAQSYPPSHIVVVNNTSTDGTVDFLRDNGWSDN
CEECCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCC
NRFTLLTLDGNQGGAGGFYAGIEFAYQRKFDYIWLMDDDGLPAKDSLSELIPYANENTYI
CEEEEEEEECCCCCCCCCHHHHEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCEE
GPLVLNNKNLEELTFTLRLPNSKKVLTTLADVEKATQDNIIPDIVMPFNGILFSRKMVEE
EEEEECCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHH
IGFPKADYFIWGDDMEYTWRAKKAGFKIFTVVSSKFYHPKELTLGTSMFFNLLKFNDTES
HCCCCCCEEEECCCCCEEEEHHHCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCH
KLKLYCMCRNNIRNLLDYKGSLISVLFCIKVCWFFLFTKPNITKLKIGIRGIWHGLTKNF
HEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCH
SHHREYL
HHHHCCC
>Mature Secondary Structure
MIIEKSICAVVVTYNRKDLLLNCLQALQAQSYPPSHIVVVNNTSTDGTVDFLRDNGWSDN
CEECCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCC
NRFTLLTLDGNQGGAGGFYAGIEFAYQRKFDYIWLMDDDGLPAKDSLSELIPYANENTYI
CEEEEEEEECCCCCCCCCHHHHEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCEE
GPLVLNNKNLEELTFTLRLPNSKKVLTTLADVEKATQDNIIPDIVMPFNGILFSRKMVEE
EEEEECCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHH
IGFPKADYFIWGDDMEYTWRAKKAGFKIFTVVSSKFYHPKELTLGTSMFFNLLKFNDTES
HCCCCCCEEEECCCCCEEEEHHHCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCH
KLKLYCMCRNNIRNLLDYKGSLISVLFCIKVCWFFLFTKPNITKLKIGIRGIWHGLTKNF
HEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCH
SHHREYL
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA