Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is 126208881

Identifier: 126208881

GI number: 126208881

Start: 1619428

End: 1619853

Strand: Direct

Name: 126208881

Synonym: APL_1417

Alternate gene names: NA

Gene position: 1619428-1619853 (Clockwise)

Preceding gene: 126208880

Following gene: 126208886

Centisome position: 71.2

GC content: 40.14

Gene sequence:

>426_bases
ATGCCGATGAGTCGTTTAGAACGCCTTTTACATGCGTTATTATTTGAAACCTTCGCAATTCTTTTTACTCTCATCGGTAT
GAGTTTACTGACATCACACCAAACGGGACTACTGACCGGCACTATCGTTTCGATATCCTTAGTAGCCGTATTTTGGAATA
TGCTTTTTAATGCGATATTCGACCGTTTTTTCACCGCTCCTCGAGAAACAAGAAGTACGGCATTACGTATTTTTCATACG
TTGGCTTTTGAAGGCGGTTTACTGATTTTCACCATTCCTTTAGTCGCTTATATGTTAAATGTAAACTGGTGGACGGCATT
TGTGACGGACATCGGTATGACGCTGTTTGTTGTGGTTTATACTTTCTTCTTTAATCTGCTTTATGATCATGTCCGAGCTT
GGCTGATTGCACGTAAAACAGCTTAA

Upstream 100 bases:

>100_bases
ATTTACACCGATATTATGATAACGGATGGCACAAAGGTCGCCATAAACATCGCCATTAGGTAAAATGGGACTCTTTGTCC
GATATATCTAAGAAATCACT

Downstream 100 bases:

>100_bases
ACGGCAATAAAAAAGCGGTACGATTTGCAAAAAATCTTGCAAAAAGCACCGCTTGGACAAGGACAATCTTTTATTTTTTC
TTCGCGTATTTGAGTGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Pair Family Protein

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPMSRLERLLHALLFETFAILFTLIGMSLLTSHQTGLLTGTIVSISLVAVFWNMLFNAIFDRFFTAPRETRSTALRIFHT
LAFEGGLLIFTIPLVAYMLNVNWWTAFVTDIGMTLFVVVYTFFFNLLYDHVRAWLIARKTA

Sequences:

>Translated_141_residues
MPMSRLERLLHALLFETFAILFTLIGMSLLTSHQTGLLTGTIVSISLVAVFWNMLFNAIFDRFFTAPRETRSTALRIFHT
LAFEGGLLIFTIPLVAYMLNVNWWTAFVTDIGMTLFVVVYTFFFNLLYDHVRAWLIARKTA
>Mature_140_residues
PMSRLERLLHALLFETFAILFTLIGMSLLTSHQTGLLTGTIVSISLVAVFWNMLFNAIFDRFFTAPRETRSTALRIFHTL
AFEGGLLIFTIPLVAYMLNVNWWTAFVTDIGMTLFVVVYTFFFNLLYDHVRAWLIARKTA

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16234; Mature: 16102

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSRLERLLHALLFETFAILFTLIGMSLLTSHQTGLLTGTIVSISLVAVFWNMLFNAIF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DRFFTAPRETRSTALRIFHTLAFEGGLLIFTIPLVAYMLNVNWWTAFVTDIGMTLFVVVY
HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFFFNLLYDHVRAWLIARKTA
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PMSRLERLLHALLFETFAILFTLIGMSLLTSHQTGLLTGTIVSISLVAVFWNMLFNAIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DRFFTAPRETRSTALRIFHTLAFEGGLLIFTIPLVAYMLNVNWWTAFVTDIGMTLFVVVY
HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFFFNLLYDHVRAWLIARKTA
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA