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The map label for this gene is ycsN [H]

Identifier: 126208876

GI number: 126208876

Start: 1613908

End: 1614810

Strand: Direct

Name: ycsN [H]

Synonym: APL_1412

Alternate gene names: 126208876

Gene position: 1613908-1614810 (Clockwise)

Preceding gene: 126208874

Following gene: 126208880

Centisome position: 70.96

GC content: 43.74

Gene sequence:

>903_bases
ATGCAACAGATTAATCTCAGCCCGACGCTCAACTTCAGTCGTCTTATCCAAGGTTTTTGGCGTTTGGACAAATGGCAACA
GACGCCGCAACAAACATTGGCTTTTATTGAACAATTATTAGCACTCGGTATTAATACCTTTGACCATGCGGCTTGTTACG
GCGGTTTTACGACAGAAGAATCCTTCGGAAAAGCATTAGCGTTACATAAATCGTTACGCGATAAAATGACCCTTGTGACC
AAATGCGGCATTTTATATCCGAATAAAGCCCTACCGGAGATGAAAAGTCACCATTACGATAACAGCTATCGTCATATTAT
TTGGTCGGCGGAACGCTCTCTACAAAAATTACACACGGAACAACTTGATTTATTATTGATTCATCGCTTGTCGCCTTGTG
CCGACCCGGAACAAATCGCGAAAGCCTTTGATCAGCTTTATCAAGAAGGTAAAGTCAAGAATTTCGGCGTATCCAATTAC
ACACCGGCTAAATTCTCAATGTTGCAATCTTATGTGAAGCAGCCGTTAGTGACCAACCAAATTGAAATTTCGCCGTTACA
TTTAAAACCGTTCGATGACGGCAGTTTAGATTTCTTGCTGGAAAAACGGATTAAACCGATGGCATGGTCTCCGTTTGCCG
GCGGGCGTTTATTTGATCCGTTGGACGAACGAGGTGCAAGAGTTTCTCAAGCCTTACTGGAAATTGGTGAACAAAAAGGC
GAGAGCCGTTTAGAAGTATTGGCATTAGCGTGGTTATTAGCCCATCCGGCAAAAATTATGCCGATTTTAGGTTCGGGCAA
AATTGAACGAGTGCGTACCGCAACCGAAGCATTGCAGGTATCGTTTAGCGAAGAAGAATGGATCAAAGTCTATGTCGCCG
CCCAAGGCTTCGATATTCCGTAG

Upstream 100 bases:

>100_bases
TGCTCCTAACTAATAAAGTTTGTGTAATAAATAGATCATAGTCTAAATAGGAGTAAAATCAAATAACCAATTAAACTTAC
CTATGTTATAAGGAGTGAAT

Downstream 100 bases:

>100_bases
ATAACTGAGATAAGCAAGCGGTCGAATTTTGTAAATTTTTAGCAAAATCCGGCCGCTTGAAATTATTTATACATCGATTC
AATCTGCTTACGATAGCGTT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MQQINLSPTLNFSRLIQGFWRLDKWQQTPQQTLAFIEQLLALGINTFDHAACYGGFTTEESFGKALALHKSLRDKMTLVT
KCGILYPNKALPEMKSHHYDNSYRHIIWSAERSLQKLHTEQLDLLLIHRLSPCADPEQIAKAFDQLYQEGKVKNFGVSNY
TPAKFSMLQSYVKQPLVTNQIEISPLHLKPFDDGSLDFLLEKRIKPMAWSPFAGGRLFDPLDERGARVSQALLEIGEQKG
ESRLEVLALAWLLAHPAKIMPILGSGKIERVRTATEALQVSFSEEEWIKVYVAAQGFDIP

Sequences:

>Translated_300_residues
MQQINLSPTLNFSRLIQGFWRLDKWQQTPQQTLAFIEQLLALGINTFDHAACYGGFTTEESFGKALALHKSLRDKMTLVT
KCGILYPNKALPEMKSHHYDNSYRHIIWSAERSLQKLHTEQLDLLLIHRLSPCADPEQIAKAFDQLYQEGKVKNFGVSNY
TPAKFSMLQSYVKQPLVTNQIEISPLHLKPFDDGSLDFLLEKRIKPMAWSPFAGGRLFDPLDERGARVSQALLEIGEQKG
ESRLEVLALAWLLAHPAKIMPILGSGKIERVRTATEALQVSFSEEEWIKVYVAAQGFDIP
>Mature_300_residues
MQQINLSPTLNFSRLIQGFWRLDKWQQTPQQTLAFIEQLLALGINTFDHAACYGGFTTEESFGKALALHKSLRDKMTLVT
KCGILYPNKALPEMKSHHYDNSYRHIIWSAERSLQKLHTEQLDLLLIHRLSPCADPEQIAKAFDQLYQEGKVKNFGVSNY
TPAKFSMLQSYVKQPLVTNQIEISPLHLKPFDDGSLDFLLEKRIKPMAWSPFAGGRLFDPLDERGARVSQALLEIGEQKG
ESRLEVLALAWLLAHPAKIMPILGSGKIERVRTATEALQVSFSEEEWIKVYVAAQGFDIP

Specific function: Unknown

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI48994888, Length=301, Percent_Identity=45.1827242524917, Blast_Score=267, Evalue=6e-73,
Organism=Escherichia coli, GI87081735, Length=308, Percent_Identity=25.3246753246753, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788081, Length=290, Percent_Identity=28.9655172413793, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789375, Length=290, Percent_Identity=25.1724137931034, Blast_Score=75, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6323998, Length=319, Percent_Identity=26.0188087774295, Blast_Score=82, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6319958, Length=293, Percent_Identity=25.2559726962457, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6325169, Length=291, Percent_Identity=27.1477663230241, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34067; Mature: 34067

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQINLSPTLNFSRLIQGFWRLDKWQQTPQQTLAFIEQLLALGINTFDHAACYGGFTTEE
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH
SFGKALALHKSLRDKMTLVTKCGILYPNKALPEMKSHHYDNSYRHIIWSAERSLQKLHTE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHEEEEHHHHHHHHHHHH
QLDLLLIHRLSPCADPEQIAKAFDQLYQEGKVKNFGVSNYTPAKFSMLQSYVKQPLVTNQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
IEISPLHLKPFDDGSLDFLLEKRIKPMAWSPFAGGRLFDPLDERGARVSQALLEIGEQKG
EEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
ESRLEVLALAWLLAHPAKIMPILGSGKIERVRTATEALQVSFSEEEWIKVYVAAQGFDIP
HHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MQQINLSPTLNFSRLIQGFWRLDKWQQTPQQTLAFIEQLLALGINTFDHAACYGGFTTEE
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH
SFGKALALHKSLRDKMTLVTKCGILYPNKALPEMKSHHYDNSYRHIIWSAERSLQKLHTE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHEEEEHHHHHHHHHHHH
QLDLLLIHRLSPCADPEQIAKAFDQLYQEGKVKNFGVSNYTPAKFSMLQSYVKQPLVTNQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
IEISPLHLKPFDDGSLDFLLEKRIKPMAWSPFAGGRLFDPLDERGARVSQALLEIGEQKG
EEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
ESRLEVLALAWLLAHPAKIMPILGSGKIERVRTATEALQVSFSEEEWIKVYVAAQGFDIP
HHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]