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The map label for this gene is oapA [H]

Identifier: 126208869

GI number: 126208869

Start: 1605788

End: 1607179

Strand: Reverse

Name: oapA [H]

Synonym: APL_1405

Alternate gene names: 126208869

Gene position: 1607179-1605788 (Counterclockwise)

Preceding gene: 126208873

Following gene: 126208868

Centisome position: 70.66

GC content: 44.32

Gene sequence:

>1392_bases
ATGTCACATAATCATCTCCGTAAAGAGCCGACATTCGGCGAGCCGTCCGCAAATACTGTAAATTCGGCGGAACAAGTTGC
AGAACAAATTAATTCGGACATTACTGAAAAAAGTGCCGTAAATGCTAAAGTATCGTTACATTCGACCAAAGTGCCTAGTT
ATACTTTTACGCCTACGATGACACGTCCGGTTGATGAAACGACCACATTAAAATCAATCGAGGAAACTCAACTAGTGAAA
AATGAATCAAAACTATCGACTAATGTAGATAACGGTACTACAGATACGATTAAAGATGCGGAACCGGTAAATAAAGTGAT
CGCTTCGGAAGCTAACGAATTAAAATCGACCGCTAAAAATGCCGGTTTTACATTCTCTCCTGTCGAAGACGAAGCGGAAA
GATACAAAGCGGAAGCTGTGAAAGTTGAGAAAACGGTAACGGAGGAAAAACCGACTATGAATACGAATAATATGGAACGT
GTGATTCCCGTATCGAATACGGAAAAACCGGAAACGCCAATGGCAAAAGTACCGTCCAAATTCCGTCGTTTAGGGCTTGT
TGCCGGACTGGCGGCCGTTTTAGCCGGTATCTTCTTTTGGTTAAAACCGAGCGCACCGGAAACCGTAGAAGAATTACAAG
CTCAGCAAGGCGGTTCATTACCGATTGAGTTCCGACCGGTTGATGAAGAAGAAGCGAAACGTGCCGAAGCGCAAGCAAAA
GCCGAACAGGAAGCAGCATTAGCACAGCAACAAGCGGCACAGCAAACACAACAAGCGGCGACAGAACCGACGGGAACGGC
AGCGACAAATATGCCGGCAGAAACAGCGCCTACGACTGAAACTACTATGCCTGCGGCAAATAATTCCGCGCCTACCGAAA
CGGCGCCGGTTGTAAATAAGCCTGTCGTTCAAGCGGAAGTTGCTAAGCCGAAAACTCAAGGTAGTGTGATTCATCAATCG
GAAAATAAGGCGGATAATAAAAAAGTTGAGCCTAAACAACCGAAAGTGAAGGCAATGACCGCCGATGAGTTTAATGCGAA
GAAAGCTAAAAACGCTCAGTTAGATCAATTAGTGAAGAATGTGGAGCAAGGAAAACCGGTAGAAAAAGCGACCGCTAAAG
TAGCGAAACCTACTACGACAAGCGCCGGCGTCGTTTCAAGCAAAACCTTAACGGTACCGAAAAGCACTTCATTAATGCAA
GTATTCCGTGATAATAAGTTAAATATTTCGGATGTAAACGCAATGAGTAAGGTAAACAATGTAGTAAGTAACCTCAAAGT
CGGTGAACGTATTACGGTTCGTTTGGATAAGAACAACCGCGTAGTCGAAATGAATATCGGTTCCGGCGGTAAGTTTACTC
GTCAAGCGGATGGTAGCTATAGCTTTAAATAA

Upstream 100 bases:

>100_bases
AGAGAAATTTTCTAAAAAGCGTGTGCTGATTGAGCGGAAATACTTTAAAATATAAAAAATTTATTTAGTTTTATTTTTAC
TCTAATATTTGGATATCTAA

Downstream 100 bases:

>100_bases
GAAATATCACAGAGCAACGCTATAGCCGTTGCTCTTTTTCTTTTAATATTAGGAGAAAGAGAGGTCTATTGAGGTGCCTT
TTTTAATTAAAAAGAAAATT

Product: opacity associated protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MSHNHLRKEPTFGEPSANTVNSAEQVAEQINSDITEKSAVNAKVSLHSTKVPSYTFTPTMTRPVDETTTLKSIEETQLVK
NESKLSTNVDNGTTDTIKDAEPVNKVIASEANELKSTAKNAGFTFSPVEDEAERYKAEAVKVEKTVTEEKPTMNTNNMER
VIPVSNTEKPETPMAKVPSKFRRLGLVAGLAAVLAGIFFWLKPSAPETVEELQAQQGGSLPIEFRPVDEEEAKRAEAQAK
AEQEAALAQQQAAQQTQQAATEPTGTAATNMPAETAPTTETTMPAANNSAPTETAPVVNKPVVQAEVAKPKTQGSVIHQS
ENKADNKKVEPKQPKVKAMTADEFNAKKAKNAQLDQLVKNVEQGKPVEKATAKVAKPTTTSAGVVSSKTLTVPKSTSLMQ
VFRDNKLNISDVNAMSKVNNVVSNLKVGERITVRLDKNNRVVEMNIGSGGKFTRQADGSYSFK

Sequences:

>Translated_463_residues
MSHNHLRKEPTFGEPSANTVNSAEQVAEQINSDITEKSAVNAKVSLHSTKVPSYTFTPTMTRPVDETTTLKSIEETQLVK
NESKLSTNVDNGTTDTIKDAEPVNKVIASEANELKSTAKNAGFTFSPVEDEAERYKAEAVKVEKTVTEEKPTMNTNNMER
VIPVSNTEKPETPMAKVPSKFRRLGLVAGLAAVLAGIFFWLKPSAPETVEELQAQQGGSLPIEFRPVDEEEAKRAEAQAK
AEQEAALAQQQAAQQTQQAATEPTGTAATNMPAETAPTTETTMPAANNSAPTETAPVVNKPVVQAEVAKPKTQGSVIHQS
ENKADNKKVEPKQPKVKAMTADEFNAKKAKNAQLDQLVKNVEQGKPVEKATAKVAKPTTTSAGVVSSKTLTVPKSTSLMQ
VFRDNKLNISDVNAMSKVNNVVSNLKVGERITVRLDKNNRVVEMNIGSGGKFTRQADGSYSFK
>Mature_462_residues
SHNHLRKEPTFGEPSANTVNSAEQVAEQINSDITEKSAVNAKVSLHSTKVPSYTFTPTMTRPVDETTTLKSIEETQLVKN
ESKLSTNVDNGTTDTIKDAEPVNKVIASEANELKSTAKNAGFTFSPVEDEAERYKAEAVKVEKTVTEEKPTMNTNNMERV
IPVSNTEKPETPMAKVPSKFRRLGLVAGLAAVLAGIFFWLKPSAPETVEELQAQQGGSLPIEFRPVDEEEAKRAEAQAKA
EQEAALAQQQAAQQTQQAATEPTGTAATNMPAETAPTTETTMPAANNSAPTETAPVVNKPVVQAEVAKPKTQGSVIHQSE
NKADNKKVEPKQPKVKAMTADEFNAKKAKNAQLDQLVKNVEQGKPVEKATAKVAKPTTTSAGVVSSKTLTVPKSTSLMQV
FRDNKLNISDVNAMSKVNNVVSNLKVGERITVRLDKNNRVVEMNIGSGGKFTRQADGSYSFK

Specific function: Cell envelope protein involved in phase variation [H]

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013731
- InterPro:   IPR007340 [H]

Pfam domain/function: PF04225 OapA; PF08525 OapA_N [H]

EC number: NA

Molecular weight: Translated: 49971; Mature: 49839

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHNHLRKEPTFGEPSANTVNSAEQVAEQINSDITEKSAVNAKVSLHSTKVPSYTFTPTM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCC
TRPVDETTTLKSIEETQLVKNESKLSTNVDNGTTDTIKDAEPVNKVIASEANELKSTAKN
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AGFTFSPVEDEAERYKAEAVKVEKTVTEEKPTMNTNNMERVIPVSNTEKPETPMAKVPSK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
FRRLGLVAGLAAVLAGIFFWLKPSAPETVEELQAQQGGSLPIEFRPVDEEEAKRAEAQAK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
AEQEAALAQQQAAQQTQQAATEPTGTAATNMPAETAPTTETTMPAANNSAPTETAPVVNK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVVQAEVAKPKTQGSVIHQSENKADNKKVEPKQPKVKAMTADEFNAKKAKNAQLDQLVKN
CCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHH
VEQGKPVEKATAKVAKPTTTSAGVVSSKTLTVPKSTSLMQVFRDNKLNISDVNAMSKVNN
HHHCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHH
VVSNLKVGERITVRLDKNNRVVEMNIGSGGKFTRQADGSYSFK
HHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
SHNHLRKEPTFGEPSANTVNSAEQVAEQINSDITEKSAVNAKVSLHSTKVPSYTFTPTM
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCC
TRPVDETTTLKSIEETQLVKNESKLSTNVDNGTTDTIKDAEPVNKVIASEANELKSTAKN
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AGFTFSPVEDEAERYKAEAVKVEKTVTEEKPTMNTNNMERVIPVSNTEKPETPMAKVPSK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
FRRLGLVAGLAAVLAGIFFWLKPSAPETVEELQAQQGGSLPIEFRPVDEEEAKRAEAQAK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
AEQEAALAQQQAAQQTQQAATEPTGTAATNMPAETAPTTETTMPAANNSAPTETAPVVNK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVVQAEVAKPKTQGSVIHQSENKADNKKVEPKQPKVKAMTADEFNAKKAKNAQLDQLVKN
CCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHH
VEQGKPVEKATAKVAKPTTTSAGVVSSKTLTVPKSTSLMQVFRDNKLNISDVNAMSKVNN
HHHCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHH
VVSNLKVGERITVRLDKNNRVVEMNIGSGGKFTRQADGSYSFK
HHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8559074; 7542800 [H]