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The map label for this gene is yfjD [C]

Identifier: 126208853

GI number: 126208853

Start: 1588913

End: 1590085

Strand: Direct

Name: yfjD [C]

Synonym: APL_1389

Alternate gene names: 126208853

Gene position: 1588913-1590085 (Clockwise)

Preceding gene: 126208852

Following gene: 126208854

Centisome position: 69.86

GC content: 41.94

Gene sequence:

>1173_bases
ATGTCGCTCAACCGCTATAAAATGCGCCACCTTGCCGAAAGCGGTCATAAAGGGGCGAAACTTGCGGAGAAACTCCTTAA
CAAAACGGATGTTTTACTTAGTCTTATCCTTATTTGTAATAACTTAGTCAATATCGCCGCCTCCGCGATTGCTACCATGA
TCGGTATGCGTTTAGCCGGCGATGCCGGTGTGGCGATTGCCACCGGTGCGCTGACTTTTGTGATGCTGGTTTTCTCGGAA
ATTCTGCCTAAAACCATTGCGGCGATTTATCCGGAAAAAATCGGCTTTTTCGCCAGTTATATCTTAACGCCGTTAAAAAA
ATTATTAATGCCGCTTGTGTTCTTGATGAATTTAATCATCAGCGGCTTAATGAAATTATTACGCGTTAAAAAAGATGAAA
ATACCGGATTAAGTGCGGAAGAATTACGGGGCGTAGTATTGGAAGCGGGCAAATTTATTCCGACCGAACACCAAGAAATG
CTAATTTCCATTTTAGATATGGAGAAAGTGACGGTTGAAGATATTATGGTGCCGCGTAACGATATCGGTAGCATTGATAT
TGATGACGATTGGAAATCGATTATGCGCCAGCTTAACCACGCCGCTCACGCCCGAGTCGTGCTTTATAAAGGTAATATGG
ATAAAAACATCATCGGTATGCTGCGCGTACGAGAGGCGTTCCGTTTACTTTTAGAAAAAGACGAGCCGAGTAAAGAAACG
CTGATTCGAGCGGTTGATGAAGTTTATTTCATTCCCGAAGGGACACCTTTAACCACACAATTAATGAATTTCAAAAGTAA
TAAAGAACGTATCGGTTTAGTGGTGGACGAATACGGGGATATTAAAGGCTTAGTCACTTTGGAAGACATTCTTGAAGAAA
TCGTCGGCGAATTTACTACCTCGACCGCACCGACGATAGAAGAAGAAGTCAAACCGCAGTCCGACGGCTCGGTGATTATT
GAAGGTTCGGCAAATTTACGTGATCTGAATAAGTTATTTGATTGGAATCTGCCTGTTGATGAAGCCAGAACCTTTAACGG
ATTGATCCTGGAACATTTAGAGAAAATTCCGGACGAAGATACTCAGTTTAGCTTATATAACCTGAAAATAACGATTCTTG
AAGTGAGCGATAATATGGTTAAACAAGCGAAAGTCGAGCCTATACAAAATTAA

Upstream 100 bases:

>100_bases
GACATTTATTTTGGACAGTATTCCCCTGAGTACTCTTTTTATTTCACTCGCAATTCTCTTATTCCTTTCTGAGTTTTTCT
CAAGTTCCGAAACGGGACTA

Downstream 100 bases:

>100_bases
TCCTCGTCTTATACAAGCGGTGGAATTTGCAAAAAATGTTGTAAATTCCACCGCTTTTTTATTAACCAGAAACGATTAAA
GCATATTTTTTAATCAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSLNRYKMRHLAESGHKGAKLAEKLLNKTDVLLSLILICNNLVNIAASAIATMIGMRLAGDAGVAIATGALTFVMLVFSE
ILPKTIAAIYPEKIGFFASYILTPLKKLLMPLVFLMNLIISGLMKLLRVKKDENTGLSAEELRGVVLEAGKFIPTEHQEM
LISILDMEKVTVEDIMVPRNDIGSIDIDDDWKSIMRQLNHAAHARVVLYKGNMDKNIIGMLRVREAFRLLLEKDEPSKET
LIRAVDEVYFIPEGTPLTTQLMNFKSNKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSTAPTIEEEVKPQSDGSVII
EGSANLRDLNKLFDWNLPVDEARTFNGLILEHLEKIPDEDTQFSLYNLKITILEVSDNMVKQAKVEPIQN

Sequences:

>Translated_390_residues
MSLNRYKMRHLAESGHKGAKLAEKLLNKTDVLLSLILICNNLVNIAASAIATMIGMRLAGDAGVAIATGALTFVMLVFSE
ILPKTIAAIYPEKIGFFASYILTPLKKLLMPLVFLMNLIISGLMKLLRVKKDENTGLSAEELRGVVLEAGKFIPTEHQEM
LISILDMEKVTVEDIMVPRNDIGSIDIDDDWKSIMRQLNHAAHARVVLYKGNMDKNIIGMLRVREAFRLLLEKDEPSKET
LIRAVDEVYFIPEGTPLTTQLMNFKSNKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSTAPTIEEEVKPQSDGSVII
EGSANLRDLNKLFDWNLPVDEARTFNGLILEHLEKIPDEDTQFSLYNLKITILEVSDNMVKQAKVEPIQN
>Mature_389_residues
SLNRYKMRHLAESGHKGAKLAEKLLNKTDVLLSLILICNNLVNIAASAIATMIGMRLAGDAGVAIATGALTFVMLVFSEI
LPKTIAAIYPEKIGFFASYILTPLKKLLMPLVFLMNLIISGLMKLLRVKKDENTGLSAEELRGVVLEAGKFIPTEHQEML
ISILDMEKVTVEDIMVPRNDIGSIDIDDDWKSIMRQLNHAAHARVVLYKGNMDKNIIGMLRVREAFRLLLEKDEPSKETL
IRAVDEVYFIPEGTPLTTQLMNFKSNKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSTAPTIEEEVKPQSDGSVIIE
GSANLRDLNKLFDWNLPVDEARTFNGLILEHLEKIPDEDTQFSLYNLKITILEVSDNMVKQAKVEPIQN

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=379, Percent_Identity=24.2744063324538, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI94681046, Length=314, Percent_Identity=27.3885350318471, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI145693175, Length=391, Percent_Identity=60.1023017902813, Blast_Score=491, Evalue=1e-140,
Organism=Escherichia coli, GI87082033, Length=276, Percent_Identity=29.3478260869565, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1790664, Length=414, Percent_Identity=21.0144927536232, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1786879, Length=220, Percent_Identity=23.6363636363636, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788119, Length=275, Percent_Identity=25.4545454545455, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324512, Length=291, Percent_Identity=26.1168384879725, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 43608; Mature: 43476

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNRYKMRHLAESGHKGAKLAEKLLNKTDVLLSLILICNNLVNIAASAIATMIGMRLAG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAGVAIATGALTFVMLVFSEILPKTIAAIYPEKIGFFASYILTPLKKLLMPLVFLMNLII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLMKLLRVKKDENTGLSAEELRGVVLEAGKFIPTEHQEMLISILDMEKVTVEDIMVPRN
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
DIGSIDIDDDWKSIMRQLNHAAHARVVLYKGNMDKNIIGMLRVREAFRLLLEKDEPSKET
CCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
LIRAVDEVYFIPEGTPLTTQLMNFKSNKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTT
HHHHHHHEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCC
STAPTIEEEVKPQSDGSVIIEGSANLRDLNKLFDWNLPVDEARTFNGLILEHLEKIPDED
CCCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
TQFSLYNLKITILEVSDNMVKQAKVEPIQN
CCEEEEEEEEEEEECCCHHHHHHCCCCCCC
>Mature Secondary Structure 
SLNRYKMRHLAESGHKGAKLAEKLLNKTDVLLSLILICNNLVNIAASAIATMIGMRLAG
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAGVAIATGALTFVMLVFSEILPKTIAAIYPEKIGFFASYILTPLKKLLMPLVFLMNLII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLMKLLRVKKDENTGLSAEELRGVVLEAGKFIPTEHQEMLISILDMEKVTVEDIMVPRN
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
DIGSIDIDDDWKSIMRQLNHAAHARVVLYKGNMDKNIIGMLRVREAFRLLLEKDEPSKET
CCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
LIRAVDEVYFIPEGTPLTTQLMNFKSNKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTT
HHHHHHHEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCC
STAPTIEEEVKPQSDGSVIIEGSANLRDLNKLFDWNLPVDEARTFNGLILEHLEKIPDED
CCCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
TQFSLYNLKITILEVSDNMVKQAKVEPIQN
CCEEEEEEEEEEEECCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]