Click here to switch to the map view.

The map label for this gene is yggT [C]

Identifier: 126208845

GI number: 126208845

Start: 1583128

End: 1583661

Strand: Reverse

Name: yggT [C]

Synonym: APL_1381

Alternate gene names: 126208845

Gene position: 1583661-1583128 (Counterclockwise)

Preceding gene: 126208846

Following gene: 126208844

Centisome position: 69.63

GC content: 42.32

Gene sequence:

>534_bases
ATGGAATTTCTAGCCCCTGTTCTTTCAATCATTATCGGCTTTTTTAGCTTCGTATTAATTTTGCGTACTTGGCTGCAATT
CTGCCGAGTCGATCCTTATATGCCGTTATCACAATCACTTTTACGCCTTACTTCACCCTTAGTGAATCCGGTAAGTAAAG
TGATCCCGACCGTAAAAAACATCAATTTTGCTGCATTACTGATTGCGTTACTATTGCTTGCATTCGAGAAATTTGTGCTA
GGCGTACCCGTTGCAATGGCTGTATTAGCCGGCTTACTAGGTGTCGTGAAAACCTTCGGTAAGATCCTATTTTTCACCAC
TTTAATTCGTGCCTTAATGAGTTGGGTCACACGTGGTGATCACCCGTTAGATTATATGGTGGCGCAAATTACCGAGCCGG
TATTAGGCTTTATCCGTAAATTATTACCGCGTACCGGTATGTTAGATTTTTCGGTGATGGTACTCGGTTTCGGCTTAATT
CTGCTCAATAACCTTTTCTATCGCGTATTTGGCGTGCTTTGGGCGATTGCTTAA

Upstream 100 bases:

>100_bases
AATTTTGCAAAAAAATTGCAAAATCCGACCGCTTTCTATCATGAGGGCGGGTGTATTCCCGCCCGAATAGTTTATAGAGA
TATTTATAAGAGGAAGATAG

Downstream 100 bases:

>100_bases
TATGGAAGCGGTAGAACGTATTGAAAATCCGTGTGGCATCCGCCTGCGGATTTTTTTACAACCAAAGGCAAGTCGCGATC
AAATTGTCGGCTTACACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MEFLAPVLSIIIGFFSFVLILRTWLQFCRVDPYMPLSQSLLRLTSPLVNPVSKVIPTVKNINFAALLIALLLLAFEKFVL
GVPVAMAVLAGLLGVVKTFGKILFFTTLIRALMSWVTRGDHPLDYMVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLI
LLNNLFYRVFGVLWAIA

Sequences:

>Translated_177_residues
MEFLAPVLSIIIGFFSFVLILRTWLQFCRVDPYMPLSQSLLRLTSPLVNPVSKVIPTVKNINFAALLIALLLLAFEKFVL
GVPVAMAVLAGLLGVVKTFGKILFFTTLIRALMSWVTRGDHPLDYMVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLI
LLNNLFYRVFGVLWAIA
>Mature_177_residues
MEFLAPVLSIIIGFFSFVLILRTWLQFCRVDPYMPLSQSLLRLTSPLVNPVSKVIPTVKNINFAALLIALLLLAFEKFVL
GVPVAMAVLAGLLGVVKTFGKILFFTTLIRALMSWVTRGDHPLDYMVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLI
LLNNLFYRVFGVLWAIA

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=166, Percent_Identity=38.5542168674699, Blast_Score=112, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 19761; Mature: 19761

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLAPVLSIIIGFFSFVLILRTWLQFCRVDPYMPLSQSLLRLTSPLVNPVSKVIPTVKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
INFAALLIALLLLAFEKFVLGVPVAMAVLAGLLGVVKTFGKILFFTTLIRALMSWVTRGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPLDYMVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLILLNNLFYRVFGVLWAIA
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFLAPVLSIIIGFFSFVLILRTWLQFCRVDPYMPLSQSLLRLTSPLVNPVSKVIPTVKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
INFAALLIALLLLAFEKFVLGVPVAMAVLAGLLGVVKTFGKILFFTTLIRALMSWVTRGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPLDYMVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLILLNNLFYRVFGVLWAIA
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]