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The map label for this gene is rsmI [H]

Identifier: 126208825

GI number: 126208825

Start: 1557854

End: 1558708

Strand: Reverse

Name: rsmI [H]

Synonym: APL_1361

Alternate gene names: 126208825

Gene position: 1558708-1557854 (Counterclockwise)

Preceding gene: 126208830

Following gene: 126208822

Centisome position: 68.53

GC content: 43.86

Gene sequence:

>855_bases
ATGAAAAACGAACAAAACGGTACTTTGTATATTGTGGCGACACCAATCGGTAACCTTGGCGATATTACGCAACGCGCACT
GGATGCTTTTGCTCAAGTCGATTTAATTGCCGCCGAAGATACTCGTCATAGCGGTTTATTACTTAGCCATTACGGTATCA
AAAAACCGTTTTTTGCCTTACACGATCATAATGAACAACAAAAAGCAGCGGTATTAGTTGAAAAATTACAACAAGGGCTG
AATATTGCGCTGATCTCCGATGCCGGTACGCCATTAATTAGTGATCCGGGTTTCCACTTGGTGCGCCATTGCCGCCAAGC
CGGAGTCAAAGTCGTGCCGTTACCCGGCGCTTGTGCCGCAATTACTGCACTTTGTGCGTCCGGTATTGCCTCAGACCGCT
TTTGTTTTGAAGGGTTCTTACCGGCTAAGACAAAATCACGTTGCGATAAATTAGCAGAAGTGGCTGATGAACCGCGTACC
CTGATTTTTTATGAATCAACCCATCGCATTTTAGATACGCTTGAAGATATGCAGAAAATGTTGGGCGCAGATCGTTATGT
GGTGATGGCTCGTGAAATTACCAAAACGTGGGAAACTATTCATGGCGATACGTTGGCAAATTTAATTGCATGGTTAAATG
AAGACAGCAATCGCATTAAAGGTGAGATTGTGTTAGTGGTGGAAGGAAAACCGGAACAGGCAGATGAAGCGTTTTCTGCT
CAAGCGGTCAAATTACTCGGTTTACTTTGCCAAGAATTACCGCTGAAAAAAGCGGCGGCAATCGTAGCGGAGACTTTCGG
CTATAAAAAGAATGCACTTTATCAGTACGGTTTAGAATATCTTTCCGATAACTAA

Upstream 100 bases:

>100_bases
TTATTTTCTGTTTTAAAATAGTCGCCATTGTATTGCTCCTAATAGACTATAATGGGCGGAATAATATTGAAATCTTACTT
ATCAAACGAGTGAAAATCAA

Downstream 100 bases:

>100_bases
AATACAAGCGGTTAAATTTCCTAAAAATTTAACCGCTTATTTGTTAGATTCTCGCCAAATCAAAATTTGCTAAATCAATT
TTATCCTCTGTGCCGTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKNEQNGTLYIVATPIGNLGDITQRALDAFAQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAAVLVEKLQQGL
NIALISDAGTPLISDPGFHLVRHCRQAGVKVVPLPGACAAITALCASGIASDRFCFEGFLPAKTKSRCDKLAEVADEPRT
LIFYESTHRILDTLEDMQKMLGADRYVVMAREITKTWETIHGDTLANLIAWLNEDSNRIKGEIVLVVEGKPEQADEAFSA
QAVKLLGLLCQELPLKKAAAIVAETFGYKKNALYQYGLEYLSDN

Sequences:

>Translated_284_residues
MKNEQNGTLYIVATPIGNLGDITQRALDAFAQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAAVLVEKLQQGL
NIALISDAGTPLISDPGFHLVRHCRQAGVKVVPLPGACAAITALCASGIASDRFCFEGFLPAKTKSRCDKLAEVADEPRT
LIFYESTHRILDTLEDMQKMLGADRYVVMAREITKTWETIHGDTLANLIAWLNEDSNRIKGEIVLVVEGKPEQADEAFSA
QAVKLLGLLCQELPLKKAAAIVAETFGYKKNALYQYGLEYLSDN
>Mature_284_residues
MKNEQNGTLYIVATPIGNLGDITQRALDAFAQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAAVLVEKLQQGL
NIALISDAGTPLISDPGFHLVRHCRQAGVKVVPLPGACAAITALCASGIASDRFCFEGFLPAKTKSRCDKLAEVADEPRT
LIFYESTHRILDTLEDMQKMLGADRYVVMAREITKTWETIHGDTLANLIAWLNEDSNRIKGEIVLVVEGKPEQADEAFSA
QAVKLLGLLCQELPLKKAAAIVAETFGYKKNALYQYGLEYLSDN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=284, Percent_Identity=66.5492957746479, Blast_Score=373, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31180; Mature: 31180

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEQNGTLYIVATPIGNLGDITQRALDAFAQVDLIAAEDTRHSGLLLSHYGIKKPFFAL
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCCCCEEEE
HDHNEQQKAAVLVEKLQQGLNIALISDAGTPLISDPGFHLVRHCRQAGVKVVPLPGACAA
CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHH
ITALCASGIASDRFCFEGFLPAKTKSRCDKLAEVADEPRTLIFYESTHRILDTLEDMQKM
HHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
LGADRYVVMAREITKTWETIHGDTLANLIAWLNEDSNRIKGEIVLVVEGKPEQADEAFSA
HCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECEEEEEEEECCCCHHHHHHHH
QAVKLLGLLCQELPLKKAAAIVAETFGYKKNALYQYGLEYLSDN
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNEQNGTLYIVATPIGNLGDITQRALDAFAQVDLIAAEDTRHSGLLLSHYGIKKPFFAL
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCCCCEEEE
HDHNEQQKAAVLVEKLQQGLNIALISDAGTPLISDPGFHLVRHCRQAGVKVVPLPGACAA
CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHH
ITALCASGIASDRFCFEGFLPAKTKSRCDKLAEVADEPRTLIFYESTHRILDTLEDMQKM
HHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
LGADRYVVMAREITKTWETIHGDTLANLIAWLNEDSNRIKGEIVLVVEGKPEQADEAFSA
HCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECEEEEEEEECCCCHHHHHHHH
QAVKLLGLLCQELPLKKAAAIVAETFGYKKNALYQYGLEYLSDN
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]