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The map label for this gene is ftsY [H]

Identifier: 126208810

GI number: 126208810

Start: 1545501

End: 1547234

Strand: Reverse

Name: ftsY [H]

Synonym: APL_1346

Alternate gene names: 126208810

Gene position: 1547234-1545501 (Counterclockwise)

Preceding gene: 126208815

Following gene: 126208809

Centisome position: 68.03

GC content: 43.08

Gene sequence:

>1734_bases
ATGGCAGAAAAGAAAAAAGGTTTTTGGTCTTGGTTAGGTTTCGGTAAAAAAGATGAACCGAAACAAGCGGAAATCCAAAC
CGAACAACATACCGAATCGGCTGCAGAAGAAACTGTAGAGCAAAAAGTAGAACAAGCGGGACAAAAGGTTGAGCAGTTAC
AAGAAACGGTAGAACAAAAATTAGAAGCTCTCGAAGATAAAATTGAAGATAAGTTTGAGCAAATCGCCTCTCAGCCGGAA
GTGAAAGAATTGATTGATGCGGTCGAGAAAAAAGCGGAACAAGCCGAAGATTTTGTTGAACGTATTGAAGATACGATCGA
GCAAAAACTTGAGCAGATCGAAGCATTCGCTGAACAAAAATCGGAACGACTCGAGCAGTTTGTTGAAGATAAAGTTGAAG
ATGCTAAAGACTTTTTGCATGAAGCGGCAGATAAAATAGAACAATCTTTCGAGCAAGAAAAAGAAGAGTCGGTTTCTATT
ATTGATACGGCGAAGATTGAGCAACCGCTTGCGCCAACGGAAGAAATTGTATCGGTAGTATCTACTCCGAATGTTGAATC
GCCTCAAGAAATTCCGCAAGCGGTCGAATTTAGCGAAAAATCTGCAACCGAAAGCGAAATTAACCGCCATCAGCAAATCG
AAAAACGTGTTGAGAAAGTGGTTGATGCCGAGCTTGCCGGTGAAGTGAAAACCAAGTCTGATGCGGAAGAAAACTTTGAA
GAGTTGGAAGAGTTGGTCGAGCTTGAAACGGAAAAAGCGGAACACGAACAAGCCGAACCAAAAACGGACGAATACCAAGA
AAAACCGAGTGAAGGCGGTTTTTTCAGCCGTCTATTAAAAGGCTTAGTTAAAACGAAACAAAGTATCGGTTCCGGTTTCC
GTAATTTCTTTAGCGGTAAAAAAATCGACGACGATTTATTTGAAGAATTGGAAGAGCAGTTATTGGTCGCCGATTTAGGT
ATGCCGACGACGACGAAAGTTATCAATAACTTAACTCAACACGCCTCTAAGAAACAGCTTAAAGATGCCGATTTACTCTA
TCAACAATTAAAACTTGAACTTGGCGAGGTGTTAAAACCTGTTAGCCAGCCGCTTGAAATCGACACGAGTAAAAAGCCTT
ATGTGATTTTAATGGTCGGGGTAAACGGGGTCGGTAAAACTACCACTATCGGTAAATTGGCGCGTAAATTCCAAGCGGAA
GGCAAATCGGTAATGCTTGCCGCCGGCGATACTTTCCGTGCTGCAGCAGTGGAGCAGTTACAAGTTTGGGGGGAACGGAA
CAATATTCCTGTTGTCGCACAATCTACCGGTTCGGATTCCGCTTCGGTAATTTTCGATGCGATGCAATCGGCGGCTTCAA
AAGGGATTGATATTCTTATCGCAGATACCGCAGGTCGTTTGCAGAATAAAAACAACTTAATGGACGAGCTGAAAAAAATC
GTGCGCGTGACGAAAAAATACGATGAAAGCGCACCGCACGAAATTATGCTCACTTTAGATGCCGGCACGGGACAAAATGC
GATCAGCCAAGCGAAGTTATTTAACGAAGCGGTCGGCTTAACCGGTATTACATTAACGAAACTGGACGGTACGGCAAAAG
GCGGCGTGATCTTTGCGATAGCCGACCAATTTAACATTCCGATTCGTTTTATCGGGGTCGGAGAAAAAATTGAAGATCTC
CGTCCGTTCAATGCGGAAGAATTTATCGAAGCATTATTCGAACACGAAGAATAG

Upstream 100 bases:

>100_bases
GTGGAATTACGATTTTTTTTCATACTAACTAAAGGAAAAATAAGGATTATTTGATAAACTATACAAGTTTAGTCCATTTT
GAAGGAAAAGTGAGAAAAAT

Downstream 100 bases:

>100_bases
CAATGATTACAAATAGGCTGAAAAGACAATTTTTGCAAAAAATCAGCGAAATCGGACCGCTATTTTCTAATAGTAGAAAA
GGTAAACATAATGATTAAAT

Product: cell division protein FtsY-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 576

Protein sequence:

>577_residues
MAEKKKGFWSWLGFGKKDEPKQAEIQTEQHTESAAEETVEQKVEQAGQKVEQLQETVEQKLEALEDKIEDKFEQIASQPE
VKELIDAVEKKAEQAEDFVERIEDTIEQKLEQIEAFAEQKSERLEQFVEDKVEDAKDFLHEAADKIEQSFEQEKEESVSI
IDTAKIEQPLAPTEEIVSVVSTPNVESPQEIPQAVEFSEKSATESEINRHQQIEKRVEKVVDAELAGEVKTKSDAEENFE
ELEELVELETEKAEHEQAEPKTDEYQEKPSEGGFFSRLLKGLVKTKQSIGSGFRNFFSGKKIDDDLFEELEEQLLVADLG
MPTTTKVINNLTQHASKKQLKDADLLYQQLKLELGEVLKPVSQPLEIDTSKKPYVILMVGVNGVGKTTTIGKLARKFQAE
GKSVMLAAGDTFRAAAVEQLQVWGERNNIPVVAQSTGSDSASVIFDAMQSAASKGIDILIADTAGRLQNKNNLMDELKKI
VRVTKKYDESAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAKGGVIFAIADQFNIPIRFIGVGEKIEDL
RPFNAEEFIEALFEHEE

Sequences:

>Translated_577_residues
MAEKKKGFWSWLGFGKKDEPKQAEIQTEQHTESAAEETVEQKVEQAGQKVEQLQETVEQKLEALEDKIEDKFEQIASQPE
VKELIDAVEKKAEQAEDFVERIEDTIEQKLEQIEAFAEQKSERLEQFVEDKVEDAKDFLHEAADKIEQSFEQEKEESVSI
IDTAKIEQPLAPTEEIVSVVSTPNVESPQEIPQAVEFSEKSATESEINRHQQIEKRVEKVVDAELAGEVKTKSDAEENFE
ELEELVELETEKAEHEQAEPKTDEYQEKPSEGGFFSRLLKGLVKTKQSIGSGFRNFFSGKKIDDDLFEELEEQLLVADLG
MPTTTKVINNLTQHASKKQLKDADLLYQQLKLELGEVLKPVSQPLEIDTSKKPYVILMVGVNGVGKTTTIGKLARKFQAE
GKSVMLAAGDTFRAAAVEQLQVWGERNNIPVVAQSTGSDSASVIFDAMQSAASKGIDILIADTAGRLQNKNNLMDELKKI
VRVTKKYDESAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAKGGVIFAIADQFNIPIRFIGVGEKIEDL
RPFNAEEFIEALFEHEE
>Mature_576_residues
AEKKKGFWSWLGFGKKDEPKQAEIQTEQHTESAAEETVEQKVEQAGQKVEQLQETVEQKLEALEDKIEDKFEQIASQPEV
KELIDAVEKKAEQAEDFVERIEDTIEQKLEQIEAFAEQKSERLEQFVEDKVEDAKDFLHEAADKIEQSFEQEKEESVSII
DTAKIEQPLAPTEEIVSVVSTPNVESPQEIPQAVEFSEKSATESEINRHQQIEKRVEKVVDAELAGEVKTKSDAEENFEE
LEELVELETEKAEHEQAEPKTDEYQEKPSEGGFFSRLLKGLVKTKQSIGSGFRNFFSGKKIDDDLFEELEEQLLVADLGM
PTTTKVINNLTQHASKKQLKDADLLYQQLKLELGEVLKPVSQPLEIDTSKKPYVILMVGVNGVGKTTTIGKLARKFQAEG
KSVMLAAGDTFRAAAVEQLQVWGERNNIPVVAQSTGSDSASVIFDAMQSAASKGIDILIADTAGRLQNKNNLMDELKKIV
RVTKKYDESAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAKGGVIFAIADQFNIPIRFIGVGEKIEDLR
PFNAEEFIEALFEHEE

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=362, Percent_Identity=28.1767955801105, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI23308697, Length=362, Percent_Identity=28.1767955801105, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI226371618, Length=205, Percent_Identity=35.1219512195122, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI4507215, Length=205, Percent_Identity=35.1219512195122, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI89061728, Length=116, Percent_Identity=36.2068965517241, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI1789874, Length=325, Percent_Identity=72, Blast_Score=466, Evalue=1e-132,
Organism=Escherichia coli, GI1788963, Length=270, Percent_Identity=35.1851851851852, Blast_Score=152, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI193206261, Length=330, Percent_Identity=29.6969696969697, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17539958, Length=221, Percent_Identity=30.316742081448, Blast_Score=113, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=300, Percent_Identity=32.3333333333333, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=229, Percent_Identity=32.7510917030568, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17647949, Length=215, Percent_Identity=33.4883720930233, Blast_Score=122, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24641198, Length=302, Percent_Identity=27.1523178807947, Blast_Score=119, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 64431; Mature: 64300

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKKKGFWSWLGFGKKDEPKQAEIQTEQHTESAAEETVEQKVEQAGQKVEQLQETVEQK
CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEALEDKIEDKFEQIASQPEVKELIDAVEKKAEQAEDFVERIEDTIEQKLEQIEAFAEQK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SERLEQFVEDKVEDAKDFLHEAADKIEQSFEQEKEESVSIIDTAKIEQPLAPTEEIVSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH
STPNVESPQEIPQAVEFSEKSATESEINRHQQIEKRVEKVVDAELAGEVKTKSDAEENFE
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ELEELVELETEKAEHEQAEPKTDEYQEKPSEGGFFSRLLKGLVKTKQSIGSGFRNFFSGK
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIDDDLFEELEEQLLVADLGMPTTTKVINNLTQHASKKQLKDADLLYQQLKLELGEVLKP
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSQPLEIDTSKKPYVILMVGVNGVGKTTTIGKLARKFQAEGKSVMLAAGDTFRAAAVEQL
HCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
QVWGERNNIPVVAQSTGSDSASVIFDAMQSAASKGIDILIADTAGRLQNKNNLMDELKKI
HHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHH
VRVTKKYDESAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAKGGVIFAI
HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEE
ADQFNIPIRFIGVGEKIEDLRPFNAEEFIEALFEHEE
ECCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
AEKKKGFWSWLGFGKKDEPKQAEIQTEQHTESAAEETVEQKVEQAGQKVEQLQETVEQK
CCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEALEDKIEDKFEQIASQPEVKELIDAVEKKAEQAEDFVERIEDTIEQKLEQIEAFAEQK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SERLEQFVEDKVEDAKDFLHEAADKIEQSFEQEKEESVSIIDTAKIEQPLAPTEEIVSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH
STPNVESPQEIPQAVEFSEKSATESEINRHQQIEKRVEKVVDAELAGEVKTKSDAEENFE
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ELEELVELETEKAEHEQAEPKTDEYQEKPSEGGFFSRLLKGLVKTKQSIGSGFRNFFSGK
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIDDDLFEELEEQLLVADLGMPTTTKVINNLTQHASKKQLKDADLLYQQLKLELGEVLKP
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSQPLEIDTSKKPYVILMVGVNGVGKTTTIGKLARKFQAEGKSVMLAAGDTFRAAAVEQL
HCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
QVWGERNNIPVVAQSTGSDSASVIFDAMQSAASKGIDILIADTAGRLQNKNNLMDELKKI
HHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHH
VRVTKKYDESAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAKGGVIFAI
HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEE
ADQFNIPIRFIGVGEKIEDLRPFNAEEFIEALFEHEE
ECCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]