Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is 126208772

Identifier: 126208772

GI number: 126208772

Start: 1498244

End: 1498696

Strand: Reverse

Name: 126208772

Synonym: APL_1306

Alternate gene names: NA

Gene position: 1498696-1498244 (Counterclockwise)

Preceding gene: 126208773

Following gene: 126208771

Centisome position: 65.89

GC content: 29.58

Gene sequence:

>453_bases
ATGAAAAAACTTTTTATTTTATACGGTGCAGGCAATACAGGAAAAACAACCACATTTAATAAACTACTGGAAAAAATAAA
TGCAAAGTACTTGGATAAACTAGTGTATTTTTCTCGTCACAGCAACAATATTGATTTTATAGCAGTATTCCAATACGAAA
ATATGCGTATTGGTTTCTACTCTTCAGGTGATAGTGAATGGGAAATTAGCCATAATTTGTATGAATTACATCATAAACAA
TGTGATTTTATCTTTGGTACATCAAGAACTAGAGGTGCTGGTTGCGAAATGTTAGAGAAATTTGCAACTCTTTTTTATGG
ACATTCAGAAGAAAATGACGTTATTGAATGGTTTGCCAAAGAACGTGCAACAGATGAAGATAATATGAAAGATGAAGATA
ATATGAAAGTAACAAAAACATTATTTTCAGCTATGGAAAAATTAATTAAATAA

Upstream 100 bases:

>100_bases
GAACAACAGAAAATTATTTTTGAGCAGAATTTTAGTTGAAGTGCTGTAAGATTTACCGCATTTTTAACAGATTGAGTAAA
TGTAAAAACTAGGGGCGATT

Downstream 100 bases:

>100_bases
GCGGTTAATTTTGCAAAAAATGTTACAAATTCGACCGCTTGTAACGAATCAAAACCAACAGGAGAAAACAATGTCAGTAA
AAGGCGACATCGGCGTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKKLFILYGAGNTGKTTTFNKLLEKINAKYLDKLVYFSRHSNNIDFIAVFQYENMRIGFYSSGDSEWEISHNLYELHHKQ
CDFIFGTSRTRGAGCEMLEKFATLFYGHSEENDVIEWFAKERATDEDNMKDEDNMKVTKTLFSAMEKLIK

Sequences:

>Translated_150_residues
MKKLFILYGAGNTGKTTTFNKLLEKINAKYLDKLVYFSRHSNNIDFIAVFQYENMRIGFYSSGDSEWEISHNLYELHHKQ
CDFIFGTSRTRGAGCEMLEKFATLFYGHSEENDVIEWFAKERATDEDNMKDEDNMKVTKTLFSAMEKLIK
>Mature_150_residues
MKKLFILYGAGNTGKTTTFNKLLEKINAKYLDKLVYFSRHSNNIDFIAVFQYENMRIGFYSSGDSEWEISHNLYELHHKQ
CDFIFGTSRTRGAGCEMLEKFATLFYGHSEENDVIEWFAKERATDEDNMKDEDNMKVTKTLFSAMEKLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17572; Mature: 17572

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFILYGAGNTGKTTTFNKLLEKINAKYLDKLVYFSRHSNNIDFIAVFQYENMRIGFY
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEE
SSGDSEWEISHNLYELHHKQCDFIFGTSRTRGAGCEMLEKFATLFYGHSEENDVIEWFAK
ECCCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
ERATDEDNMKDEDNMKVTKTLFSAMEKLIK
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKKLFILYGAGNTGKTTTFNKLLEKINAKYLDKLVYFSRHSNNIDFIAVFQYENMRIGFY
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEE
SSGDSEWEISHNLYELHHKQCDFIFGTSRTRGAGCEMLEKFATLFYGHSEENDVIEWFAK
ECCCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
ERATDEDNMKDEDNMKVTKTLFSAMEKLIK
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA