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The map label for this gene is yqhA [C]

Identifier: 126208711

GI number: 126208711

Start: 1432923

End: 1433441

Strand: Reverse

Name: yqhA [C]

Synonym: APL_1245

Alternate gene names: 126208711

Gene position: 1433441-1432923 (Counterclockwise)

Preceding gene: 126208712

Following gene: 126208709

Centisome position: 63.02

GC content: 36.61

Gene sequence:

>519_bases
ATGCAACCTGTTAATAATTCGATTTTAAGTAAGATTATTTTTGCCAGCCGTTGGTTACAATTACCGATTTATTTAGGCTT
AATCGTAGTGCAAGGCATCTATGCTTATAAGTTTATGAAATCGCTCTATAACTTAATCGTTAATCTCGGCGTAATGGATG
AAAACACCATTATGCTAACGGTGTTAAACTTAATTGACGTAGTAATGATTGCTAACCTCTTAATTATGGTGATCGTCGGC
GGTTACGAAACGTTTGTTTCGAGATTAAGAGTGGATGATCATCCGGATCAACCCGAATGGCTTAACCATGTAAACGCTTC
GGTACTAAAAGTGAAATTGGGGATGTCAATCATCAGTATTTCATCGATTCATTTGCTACAAACCTTTATTAATGCCGGTA
ATTTGGATGAAAAAAACATGCAATGGCAGGTGATTATCCACGTAACTTTCTTAATTTCGGCGGTGGCAATGGCTTATACC
GATAAAATCTCTCATTCGGTTACGACAAAACATCATTAA

Upstream 100 bases:

>100_bases
TGTAATATTTGTTAAACAAGCGGTCTGATTTCTTAAAACTTTTGCAAAAAGTTGCTAAAATTAGACCGCTTTTTTAGTGC
TATTTTATATTTGAGGAAGT

Downstream 100 bases:

>100_bases
ATCGGCATAGTAGACAAAAAGGTTGGTATTTTGTCGAACTATGCCTCTATTGGACAAAAGGGTTGGTAATGATTATGTTT
AGAAATTTTTACCGACTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MQPVNNSILSKIIFASRWLQLPIYLGLIVVQGIYAYKFMKSLYNLIVNLGVMDENTIMLTVLNLIDVVMIANLLIMVIVG
GYETFVSRLRVDDHPDQPEWLNHVNASVLKVKLGMSIISISSIHLLQTFINAGNLDEKNMQWQVIIHVTFLISAVAMAYT
DKISHSVTTKHH

Sequences:

>Translated_172_residues
MQPVNNSILSKIIFASRWLQLPIYLGLIVVQGIYAYKFMKSLYNLIVNLGVMDENTIMLTVLNLIDVVMIANLLIMVIVG
GYETFVSRLRVDDHPDQPEWLNHVNASVLKVKLGMSIISISSIHLLQTFINAGNLDEKNMQWQVIIHVTFLISAVAMAYT
DKISHSVTTKHH
>Mature_172_residues
MQPVNNSILSKIIFASRWLQLPIYLGLIVVQGIYAYKFMKSLYNLIVNLGVMDENTIMLTVLNLIDVVMIANLLIMVIVG
GYETFVSRLRVDDHPDQPEWLNHVNASVLKVKLGMSIISISSIHLLQTFINAGNLDEKNMQWQVIIHVTFLISAVAMAYT
DKISHSVTTKHH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=158, Percent_Identity=38.6075949367089, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 19448; Mature: 19448

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPVNNSILSKIIFASRWLQLPIYLGLIVVQGIYAYKFMKSLYNLIVNLGVMDENTIMLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VLNLIDVVMIANLLIMVIVGGYETFVSRLRVDDHPDQPEWLNHVNASVLKVKLGMSIISI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHCHHHHHH
SSIHLLQTFINAGNLDEKNMQWQVIIHVTFLISAVAMAYTDKISHSVTTKHH
HHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQPVNNSILSKIIFASRWLQLPIYLGLIVVQGIYAYKFMKSLYNLIVNLGVMDENTIMLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VLNLIDVVMIANLLIMVIVGGYETFVSRLRVDDHPDQPEWLNHVNASVLKVKLGMSIISI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHCHHHHHH
SSIHLLQTFINAGNLDEKNMQWQVIIHVTFLISAVAMAYTDKISHSVTTKHH
HHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]