| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208693
Identifier: 126208693
GI number: 126208693
Start: 1408957
End: 1409745
Strand: Direct
Name: 126208693
Synonym: APL_1227
Alternate gene names: NA
Gene position: 1408957-1409745 (Clockwise)
Preceding gene: 126208692
Following gene: 126208696
Centisome position: 61.95
GC content: 30.8
Gene sequence:
>789_bases TTGGATTATTCTGTTGGAAAACAAACATATCAACAACTCGCGAATAAATATCAGTGTTCAGTAAGAACGATTCAACGATA TTTAGAAAAGGCTCCTAAAGCCTTCTTAAAAGCCCCTCAAAATAAATATTTAAACTTAATTATTGATACTACTTTCTTTC ATCGTGATTTTGGCGTGATGGTTTTTATTGATAGCCTTTCAACCAAAGTGGTTTATCACCAAATTGTGAAAACGGAAAAA GATATTTATTACAAGAAAGCCATCAATCATTTAAGAGAAAAAGGCTATATCATTCAATCAATTACCTGTGATGGCAGGCG TGGCTTATTGAAAGATTTAATGAATACGCCCACGCAAATGTGCCAATTTCATTTAGTAGCAATCGTGATGAGAGCATTAA GAAAAAAGCATCAATCGCACGCAGGAAGAGAATTAAAAACGATAATAAAGACGTTAAAAGTCAGTTCAAAAAATGAATTT TATTTAAAAATACATCACTGGAAAATAAAACATAAAGCCTTTTTAGAGGAACGGTCAGATAAACCGAATGAAAAAGGAAA ATATCCTTATAAACATCGTAATGTGAGAAGTGCTTATACAAGTATAAAACGTTATATGGATTATATTTTTACGTATGAAA AGTATCCTGAGTTAAATATTGAAAAGACGACAAATCGAATAGAAGGATTATTTAAAGAATTAAAAGACAAATTACGCCCA CATAGCGGATTAACGAGAAAGCATAAGATATTGTTTATACAGGACTTTTTAAATAAAAAGAGTCGGTAA
Upstream 100 bases:
>100_bases ACAAAAGTATGGCTTTAAAAATAAGCTTCAACGTTATAAATGTTCAGCTTGCAATAAAATATTTACCTTAACATCTAAAT TAAATTCGACCCAAATTTGG
Downstream 100 bases:
>100_bases AAATTTCTAAACATAATCATTACCAACCCTTTTGTCCAATAGAGGCATAGTTCGACAAAATACCAACCTTTTTGTCTACT ATGCCAACAAAAAACGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MDYSVGKQTYQQLANKYQCSVRTIQRYLEKAPKAFLKAPQNKYLNLIIDTTFFHRDFGVMVFIDSLSTKVVYHQIVKTEK DIYYKKAINHLREKGYIIQSITCDGRRGLLKDLMNTPTQMCQFHLVAIVMRALRKKHQSHAGRELKTIIKTLKVSSKNEF YLKIHHWKIKHKAFLEERSDKPNEKGKYPYKHRNVRSAYTSIKRYMDYIFTYEKYPELNIEKTTNRIEGLFKELKDKLRP HSGLTRKHKILFIQDFLNKKSR
Sequences:
>Translated_262_residues MDYSVGKQTYQQLANKYQCSVRTIQRYLEKAPKAFLKAPQNKYLNLIIDTTFFHRDFGVMVFIDSLSTKVVYHQIVKTEK DIYYKKAINHLREKGYIIQSITCDGRRGLLKDLMNTPTQMCQFHLVAIVMRALRKKHQSHAGRELKTIIKTLKVSSKNEF YLKIHHWKIKHKAFLEERSDKPNEKGKYPYKHRNVRSAYTSIKRYMDYIFTYEKYPELNIEKTTNRIEGLFKELKDKLRP HSGLTRKHKILFIQDFLNKKSR >Mature_262_residues MDYSVGKQTYQQLANKYQCSVRTIQRYLEKAPKAFLKAPQNKYLNLIIDTTFFHRDFGVMVFIDSLSTKVVYHQIVKTEK DIYYKKAINHLREKGYIIQSITCDGRRGLLKDLMNTPTQMCQFHLVAIVMRALRKKHQSHAGRELKTIIKTLKVSSKNEF YLKIHHWKIKHKAFLEERSDKPNEKGKYPYKHRNVRSAYTSIKRYMDYIFTYEKYPELNIEKTTNRIEGLFKELKDKLRP HSGLTRKHKILFIQDFLNKKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31345; Mature: 31345
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYSVGKQTYQQLANKYQCSVRTIQRYLEKAPKAFLKAPQNKYLNLIIDTTFFHRDFGVM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCE VFIDSLSTKVVYHQIVKTEKDIYYKKAINHLREKGYIIQSITCDGRRGLLKDLMNTPTQM EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHH CQFHLVAIVMRALRKKHQSHAGRELKTIIKTLKVSSKNEFYLKIHHWKIKHKAFLEERSD HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHCC KPNEKGKYPYKHRNVRSAYTSIKRYMDYIFTYEKYPELNIEKTTNRIEGLFKELKDKLRP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC HSGLTRKHKILFIQDFLNKKSR CCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDYSVGKQTYQQLANKYQCSVRTIQRYLEKAPKAFLKAPQNKYLNLIIDTTFFHRDFGVM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCE VFIDSLSTKVVYHQIVKTEKDIYYKKAINHLREKGYIIQSITCDGRRGLLKDLMNTPTQM EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHH CQFHLVAIVMRALRKKHQSHAGRELKTIIKTLKVSSKNEFYLKIHHWKIKHKAFLEERSD HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHCC KPNEKGKYPYKHRNVRSAYTSIKRYMDYIFTYEKYPELNIEKTTNRIEGLFKELKDKLRP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC HSGLTRKHKILFIQDFLNKKSR CCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA