Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 126208538

GI number: 126208538

Start: 1234526

End: 1234822

Strand: Direct

Name: yajC [H]

Synonym: APL_1066

Alternate gene names: 126208538

Gene position: 1234526-1234822 (Clockwise)

Preceding gene: 126208536

Following gene: 162329625

Centisome position: 54.28

GC content: 39.06

Gene sequence:

>297_bases
ATGCAACAAGGCGGCGGATTAGAAATGATCGTAATTTTAGCGGTTTTCGGTCTTATTTTTTACTTTATGATTTATCGCCC
ACAAGCGAAACGCCAAAAACAACAACGCGATTTACTTTCTAACCTTGCGAAAGGCGATGAAGTATTAACAAACGGCGGCT
TAATCGGTCGTATTACAAAAGTCAGTGCTGAAAACGAAAACATCGTGATCGCATTAAACGATACGACTGAAGTTGTAATT
TCTCGTAACTATGTCGTTGCGGTATTACCAAAAGGTCAAATGAAAGCCCTTTCTTAA

Upstream 100 bases:

>100_bases
GTTAAATAAGCGATTTTATGCTATTTTAAACACCAATTTTCCCATTCATACGGGAATTTTGTCTTTTCAACACTAACTTA
TTGATTTTTAAGGAGCTTTT

Downstream 100 bases:

>100_bases
TTTTCCTATCATTTAGGGGACTAATTGTGTTAAATCGTTTCCCATTATGGAAGAACCTGATGATTATTATTATCGTACTC
ATCGGGGGCTTATATGCTCT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MQQGGGLEMIVILAVFGLIFYFMIYRPQAKRQKQQRDLLSNLAKGDEVLTNGGLIGRITKVSAENENIVIALNDTTEVVI
SRNYVVAVLPKGQMKALS

Sequences:

>Translated_98_residues
MQQGGGLEMIVILAVFGLIFYFMIYRPQAKRQKQQRDLLSNLAKGDEVLTNGGLIGRITKVSAENENIVIALNDTTEVVI
SRNYVVAVLPKGQMKALS
>Mature_98_residues
MQQGGGLEMIVILAVFGLIFYFMIYRPQAKRQKQQRDLLSNLAKGDEVLTNGGLIGRITKVSAENENIVIALNDTTEVVI
SRNYVVAVLPKGQMKALS

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=95, Percent_Identity=68.4210526315789, Blast_Score=134, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 10809; Mature: 10809

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGGGLEMIVILAVFGLIFYFMIYRPQAKRQKQQRDLLSNLAKGDEVLTNGGLIGRITK
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEE
VSAENENIVIALNDTTEVVISRNYVVAVLPKGQMKALS
ECCCCCEEEEEECCCEEEEEECCEEEEEECCCCCCCCC
>Mature Secondary Structure
MQQGGGLEMIVILAVFGLIFYFMIYRPQAKRQKQQRDLLSNLAKGDEVLTNGGLIGRITK
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEE
VSAENENIVIALNDTTEVVISRNYVVAVLPKGQMKALS
ECCCCCEEEEEECCCEEEEEECCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]