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The map label for this gene is tmcA [H]

Identifier: 126208433

GI number: 126208433

Start: 1099185

End: 1100414

Strand: Reverse

Name: tmcA [H]

Synonym: APL_0957

Alternate gene names: 126208433

Gene position: 1100414-1099185 (Counterclockwise)

Preceding gene: 126208435

Following gene: 126208432

Centisome position: 48.38

GC content: 38.94

Gene sequence:

>1230_bases
ATGACAACACCAATGATTGATTTACAGATTGCCTGTGAAAATAGTGAAAATTTACCCAGCTTAGAACAATTAACTCTTTG
GGTGCAAACAGCGCTGGCTTATGAAGCTCAAACGGAGGATTTTCCTGAAACGGAAATGACTATTCGCATTGTTGATGAAG
CCGAGAGCCACGAATTAAACCTGACCTATCGTGGTAAAGATAAACCAACCAATGTACTCTCTTTTCCTTTTGAAGTGCCG
GAAGGTATTGAATTGCCGCTATTAGGCGATTTAGTCATCTGCCGCCAAGTGGTAGAAAAAGAGGTGGAAGAACAGCAAAT
ATCCCTTGAATCTCATTGTGATGAAATTCATCACACTCATCAAAAAAATATAACAAAAACCGACTTTTATCGTCTTCTTG
CCGCAGCGCACTATAAAACAACGCCTACGGATTTACGCCGTTTATTTGATGGCGAAAATCAGATTTTATTTCCTTATTCA
GAAAACGGGCAACTTATTGGTGGGATTTGGGCGATCAATGAAGGAGGGCTAGATAATGAACTTTCTCAAGCCATTTGGCG
AGGAGAGCGGCGCCCTCAAGGGAATTTAGTGGCGCAATATCTTTGCTATCAAGGTAATCTACCCGAAGCTCCGCAGTTAT
ACTCTATCCGAATTTCTCGTATTGCCGTTGAACCTCATTTCCAAAATCAAGGTATTGGCAAGCGGTTAATTTCTGATTTC
ATTTTGCAAATCTCAAAACAAAAACAACCGCTTGTTGATTTTATTTCGGTGAGTTTTGGACAAACCGAAGCATTAACCTA
TTTTTGGCAACAATGCGGTTTTGAATTAGTCCAAATTACGCCGAATAAAGAAGCCAGTAGTGGTTATTACAGCGCAATGA
TGCTCTATCCTTTAACGGAGAAAGGCAAACAATTTGTCAAAAAAGCGCAAATGCAATTTAGCCGAAATCAAGCACTTTTG
CCCCATATCCAAAATGGCAATCAAAAAATGACTAAATATCTCAAGCTAGATAAAACTGATTGGCATGACTTATACGGTTT
TGCTTATGCACAACGTTCTTTCCAAGCAAGTTATGCCAGTTTAAAAAGACTTTATTGGCAATATCCTGAACAATTTTCTG
CGATGAAAGGTATTTTTGAACGTGAAGAGCCATTACCCAACAACAAAAAGCAATGGCTTAACCATTACAGAACGTTGGTA
CAAAAAATTTTACAGGAAAATGATGGATAG

Upstream 100 bases:

>100_bases
ATAGGTAAATAAATAGAATTTCAAATTAAAAAAGTCATAGTTTTCCCCTTCCCTCTTCGGGTAAAATAACCAGCAATTTA
GATTTAAGGAAAAAGTATTT

Downstream 100 bases:

>100_bases
TCCTTAACAAAAATTAATGTTTTATTTCCTATAAAACATCCGATCAGTATTATTTTTGATTAAAAAAAGAACAAACAGAT
CATGACAAACGTTTGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MTTPMIDLQIACENSENLPSLEQLTLWVQTALAYEAQTEDFPETEMTIRIVDEAESHELNLTYRGKDKPTNVLSFPFEVP
EGIELPLLGDLVICRQVVEKEVEEQQISLESHCDEIHHTHQKNITKTDFYRLLAAAHYKTTPTDLRRLFDGENQILFPYS
ENGQLIGGIWAINEGGLDNELSQAIWRGERRPQGNLVAQYLCYQGNLPEAPQLYSIRISRIAVEPHFQNQGIGKRLISDF
ILQISKQKQPLVDFISVSFGQTEALTYFWQQCGFELVQITPNKEASSGYYSAMMLYPLTEKGKQFVKKAQMQFSRNQALL
PHIQNGNQKMTKYLKLDKTDWHDLYGFAYAQRSFQASYASLKRLYWQYPEQFSAMKGIFEREEPLPNNKKQWLNHYRTLV
QKILQENDG

Sequences:

>Translated_409_residues
MTTPMIDLQIACENSENLPSLEQLTLWVQTALAYEAQTEDFPETEMTIRIVDEAESHELNLTYRGKDKPTNVLSFPFEVP
EGIELPLLGDLVICRQVVEKEVEEQQISLESHCDEIHHTHQKNITKTDFYRLLAAAHYKTTPTDLRRLFDGENQILFPYS
ENGQLIGGIWAINEGGLDNELSQAIWRGERRPQGNLVAQYLCYQGNLPEAPQLYSIRISRIAVEPHFQNQGIGKRLISDF
ILQISKQKQPLVDFISVSFGQTEALTYFWQQCGFELVQITPNKEASSGYYSAMMLYPLTEKGKQFVKKAQMQFSRNQALL
PHIQNGNQKMTKYLKLDKTDWHDLYGFAYAQRSFQASYASLKRLYWQYPEQFSAMKGIFEREEPLPNNKKQWLNHYRTLV
QKILQENDG
>Mature_408_residues
TTPMIDLQIACENSENLPSLEQLTLWVQTALAYEAQTEDFPETEMTIRIVDEAESHELNLTYRGKDKPTNVLSFPFEVPE
GIELPLLGDLVICRQVVEKEVEEQQISLESHCDEIHHTHQKNITKTDFYRLLAAAHYKTTPTDLRRLFDGENQILFPYSE
NGQLIGGIWAINEGGLDNELSQAIWRGERRPQGNLVAQYLCYQGNLPEAPQLYSIRISRIAVEPHFQNQGIGKRLISDFI
LQISKQKQPLVDFISVSFGQTEALTYFWQQCGFELVQITPNKEASSGYYSAMMLYPLTEKGKQFVKKAQMQFSRNQALLP
HIQNGNQKMTKYLKLDKTDWHDLYGFAYAQRSFQASYASLKRLYWQYPEQFSAMKGIFEREEPLPNNKKQWLNHYRTLVQ
KILQENDG

Specific function: Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) [H]

COG id: COG1444

COG function: function code R; Predicted P-loop ATPase fused to an acetyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788818, Length=282, Percent_Identity=39.0070921985816, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1786880, Length=112, Percent_Identity=58.9285714285714, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR007807 [H]

Pfam domain/function: PF05127 DUF699 [H]

EC number: NA

Molecular weight: Translated: 47375; Mature: 47244

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPMIDLQIACENSENLPSLEQLTLWVQTALAYEAQTEDFPETEMTIRIVDEAESHELN
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEE
LTYRGKDKPTNVLSFPFEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESHCDEIHHTH
EEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKNITKTDFYRLLAAAHYKTTPTDLRRLFDGENQILFPYSENGQLIGGIWAINEGGLDNE
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCCCHH
LSQAIWRGERRPQGNLVAQYLCYQGNLPEAPQLYSIRISRIAVEPHFQNQGIGKRLISDF
HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHH
ILQISKQKQPLVDFISVSFGQTEALTYFWQQCGFELVQITPNKEASSGYYSAMMLYPLTE
HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCH
KGKQFVKKAQMQFSRNQALLPHIQNGNQKMTKYLKLDKTDWHDLYGFAYAQRSFQASYAS
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LKRLYWQYPEQFSAMKGIFEREEPLPNNKKQWLNHYRTLVQKILQENDG
HHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTPMIDLQIACENSENLPSLEQLTLWVQTALAYEAQTEDFPETEMTIRIVDEAESHELN
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEE
LTYRGKDKPTNVLSFPFEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESHCDEIHHTH
EEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKNITKTDFYRLLAAAHYKTTPTDLRRLFDGENQILFPYSENGQLIGGIWAINEGGLDNE
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCCCHH
LSQAIWRGERRPQGNLVAQYLCYQGNLPEAPQLYSIRISRIAVEPHFQNQGIGKRLISDF
HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHH
ILQISKQKQPLVDFISVSFGQTEALTYFWQQCGFELVQITPNKEASSGYYSAMMLYPLTE
HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCH
KGKQFVKKAQMQFSRNQALLPHIQNGNQKMTKYLKLDKTDWHDLYGFAYAQRSFQASYAS
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LKRLYWQYPEQFSAMKGIFEREEPLPNNKKQWLNHYRTLVQKILQENDG
HHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA