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The map label for this gene is fdx [H]

Identifier: 126208400

GI number: 126208400

Start: 1066724

End: 1067065

Strand: Reverse

Name: fdx [H]

Synonym: APL_0924

Alternate gene names: 126208400

Gene position: 1067065-1066724 (Counterclockwise)

Preceding gene: 126208401

Following gene: 126208399

Centisome position: 46.91

GC content: 43.57

Gene sequence:

>342_bases
ATGCCAAAAGTTGTTTTTCTTCCGCATGAAGAGTTCTGCCCGGAAGGTATGGTGATTGAAGCGCAAACCGGCGACAATTT
ATTAGAGTTAGCGCACAATGCGGGGGTTGAAATTCACCATGCTTGTGACGGTTCTTGTGCGTGTACCACTTGCCATGTGG
TAATTCGTGAAGGATTTGATTCATTAAATGAAACGACCGATCAAGAAGAAGATATGCTAGATAAAGCATGGGGTCTGGAA
ATGGACAGCCGTTTAAGTTGCCAATGTGTAGTCGGCGAGGAAGACTTAGTGGTAGAGATTCCGAAATATAACTTAAATCA
TGCAAATGAGGTGGCACACTAA

Upstream 100 bases:

>100_bases
GAATACTCGGAAAATAGTATTTGCAAAGAATCGGCAAAATCCGACCGCTTGCATTAATTGATTTCCGTGTCTTTCGATGG
TAAATCAAAGAGAGGATATT

Downstream 100 bases:

>100_bases
TGAAATGGTCTGATACACGCATGATTGCGGAAAATCTCTATGATATGAATCCGGATTTAGATCCGACAACGGTTCGTTTT
ACCGATATGCACAAATGGAT

Product: 2Fe-2S ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPKVVFLPHEEFCPEGMVIEAQTGDNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKAWGLE
MDSRLSCQCVVGEEDLVVEIPKYNLNHANEVAH

Sequences:

>Translated_113_residues
MPKVVFLPHEEFCPEGMVIEAQTGDNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKAWGLE
MDSRLSCQCVVGEEDLVVEIPKYNLNHANEVAH
>Mature_112_residues
PKVVFLPHEEFCPEGMVIEAQTGDNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKAWGLEM
DSRLSCQCVVGEEDLVVEIPKYNLNHANEVAH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=91, Percent_Identity=41.7582417582418, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=63.6363636363636, Blast_Score=159, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17544202, Length=91, Percent_Identity=40.6593406593407, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=89, Percent_Identity=39.3258426966292, Blast_Score=67, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24661503, Length=91, Percent_Identity=41.7582417582418, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12524; Mature: 12393

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVVFLPHEEFCPEGMVIEAQTGDNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFD
CCEEEECCCHHHCCCCEEEEECCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHH
SLNETTDQEEDMLDKAWGLEMDSRLSCQCVVGEEDLVVEIPKYNLNHANEVAH
HHCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PKVVFLPHEEFCPEGMVIEAQTGDNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFD
CEEEECCCHHHCCCCEEEEECCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHH
SLNETTDQEEDMLDKAWGLEMDSRLSCQCVVGEEDLVVEIPKYNLNHANEVAH
HHCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]