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The map label for this gene is ycjY [C]

Identifier: 126208383

GI number: 126208383

Start: 1048403

End: 1049545

Strand: Reverse

Name: ycjY [C]

Synonym: APL_0907

Alternate gene names: 126208383

Gene position: 1049545-1048403 (Counterclockwise)

Preceding gene: 126208385

Following gene: 126208382

Centisome position: 46.14

GC content: 39.81

Gene sequence:

>1143_bases
ATGAAAATTCGTACTAAATTAACCGCACTTTCTAGTGCGCTTTTACTTAATTCTACATTCATCGGAGGCAATGCTATGGC
AAATTTACCGCAATCAGCAATAATGATTGAAGTCCCAACTCAAACCGTTCAACTGACTCAAGAATGGGATAAGAATTTTC
CAAAGTCAGATAAAGTGGAACACCGCAAAGTAACTTTTAAAAATCGTTATGGTATTACTTTGGTTGGTGACTTGTATGTA
CCGAAAGGCGCGACAGGTAAATTACCTGCGATTGCGGTAAGCGGACCATTTGGTGCGGTAAAAGAACAAACATCGGGGTT
GTATGCGCAACATATGGCAGAGCGAGGTTTTATTACCGTAGCATTTGATGGTTCGTACACTGGGGAAAGCTCAGGTTTAC
CACGTAATGTACCTTCTCCTGAAATTAACACAGAGGATTTTTCAGCAGCAGTAGATTTTCTGGGTTCACTGGAAAATGTA
GATCGTGAGAAAATCGGTATTTTAGGTATTTGTGGTTGGGGTGGTTTCGCATTAAATGCGGCAATTTCGGATACTCGTGT
AAAAGCGGTTGCAGTAAGCACAATGTATGATATGACTCGTGTTAATGCGAATGGTTACGAAATCAAACTTGATCCGAAAG
GGCAATATGATCGAGTGCCAGCACAAACTGCAGAGGAACGCTATAAAATGAAAGAGGGATTAAATAACGCCCGTTGGGAA
GCAATGAAAGACGGTTATGCAACGTTATTGCCTGCGAACAATCTCGATCCGAAAAAAGACATTATGGCTAAAACACCGAA
ATTCTTTGCGGAATGTGCGAATTTCTACCGTACTGAACGAGGTTTTCATCCACGTTCAGTAAATTCGAACCCTGAACATT
CTTGGACGACAACTGCATTTTTACCATTTATCAATATGCCGATTTTGAAATATGCTGCAGAGTTAAAAGCACCAGCGCTA
GTGGTTCACGGTGAAAAAGCGCATTCTCGTTATTTTGGTGAAGATGCATTCAAAGCTTTAGGTAGTAAAAATAAAGAGCT
TGTTATTGTAGAGGGGGCTTCTCATACAGATTTATATGATGATGTAGCAGGTAAAATTCCATACGATAAATTTGAACAGT
TCTTTAAAGCTAACTTGAAATAA

Upstream 100 bases:

>100_bases
AACCTGAGTGAATAAATGTTATTGAATTTTTGGTCATTATCATTTGAATGGAAATTTTTATAATGTACACATCTTTTGAA
ATGATTAATGAGGAAAGCAA

Downstream 100 bases:

>100_bases
TAACAAGCGGTCAAGTTTTTCTAAATTTTTGCAAAAAATGAGAGGAATTTGACCGCTTATCTTTTTGAAAACCGGAGAAC
AAAAATGCAATACGCTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKIRTKLTALSSALLLNSTFIGGNAMANLPQSAIMIEVPTQTVQLTQEWDKNFPKSDKVEHRKVTFKNRYGITLVGDLYV
PKGATGKLPAIAVSGPFGAVKEQTSGLYAQHMAERGFITVAFDGSYTGESSGLPRNVPSPEINTEDFSAAVDFLGSLENV
DREKIGILGICGWGGFALNAAISDTRVKAVAVSTMYDMTRVNANGYEIKLDPKGQYDRVPAQTAEERYKMKEGLNNARWE
AMKDGYATLLPANNLDPKKDIMAKTPKFFAECANFYRTERGFHPRSVNSNPEHSWTTTAFLPFINMPILKYAAELKAPAL
VVHGEKAHSRYFGEDAFKALGSKNKELVIVEGASHTDLYDDVAGKIPYDKFEQFFKANLK

Sequences:

>Translated_380_residues
MKIRTKLTALSSALLLNSTFIGGNAMANLPQSAIMIEVPTQTVQLTQEWDKNFPKSDKVEHRKVTFKNRYGITLVGDLYV
PKGATGKLPAIAVSGPFGAVKEQTSGLYAQHMAERGFITVAFDGSYTGESSGLPRNVPSPEINTEDFSAAVDFLGSLENV
DREKIGILGICGWGGFALNAAISDTRVKAVAVSTMYDMTRVNANGYEIKLDPKGQYDRVPAQTAEERYKMKEGLNNARWE
AMKDGYATLLPANNLDPKKDIMAKTPKFFAECANFYRTERGFHPRSVNSNPEHSWTTTAFLPFINMPILKYAAELKAPAL
VVHGEKAHSRYFGEDAFKALGSKNKELVIVEGASHTDLYDDVAGKIPYDKFEQFFKANLK
>Mature_380_residues
MKIRTKLTALSSALLLNSTFIGGNAMANLPQSAIMIEVPTQTVQLTQEWDKNFPKSDKVEHRKVTFKNRYGITLVGDLYV
PKGATGKLPAIAVSGPFGAVKEQTSGLYAQHMAERGFITVAFDGSYTGESSGLPRNVPSPEINTEDFSAAVDFLGSLENV
DREKIGILGICGWGGFALNAAISDTRVKAVAVSTMYDMTRVNANGYEIKLDPKGQYDRVPAQTAEERYKMKEGLNNARWE
AMKDGYATLLPANNLDPKKDIMAKTPKFFAECANFYRTERGFHPRSVNSNPEHSWTTTAFLPFINMPILKYAAELKAPAL
VVHGEKAHSRYFGEDAFKALGSKNKELVIVEGASHTDLYDDVAGKIPYDKFEQFFKANLK

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

Organism=Escherichia coli, GI221142683, Length=310, Percent_Identity=34.8387096774194, Blast_Score=158, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 41914; Mature: 41914

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRTKLTALSSALLLNSTFIGGNAMANLPQSAIMIEVPTQTVQLTQEWDKNFPKSDKVE
CCCHHHHHHHHHHHHHHCEEECCCHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCC
HRKVTFKNRYGITLVGDLYVPKGATGKLPAIAVSGPFGAVKEQTSGLYAQHMAERGFITV
CEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHCCEEEE
AFDGSYTGESSGLPRNVPSPEINTEDFSAAVDFLGSLENVDREKIGILGICGWGGFALNA
EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCEEEEE
AISDTRVKAVAVSTMYDMTRVNANGYEIKLDPKGQYDRVPAQTAEERYKMKEGLNNARWE
ECCCCEEEEEEHHHHHHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
AMKDGYATLLPANNLDPKKDIMAKTPKFFAECANFYRTERGFHPRSVNSNPEHSWTTTAF
HHHCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHEEH
LPFINMPILKYAAELKAPALVVHGEKAHSRYFGEDAFKALGSKNKELVIVEGASHTDLYD
HHHHCCHHHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCHHH
DVAGKIPYDKFEQFFKANLK
HHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKIRTKLTALSSALLLNSTFIGGNAMANLPQSAIMIEVPTQTVQLTQEWDKNFPKSDKVE
CCCHHHHHHHHHHHHHHCEEECCCHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCC
HRKVTFKNRYGITLVGDLYVPKGATGKLPAIAVSGPFGAVKEQTSGLYAQHMAERGFITV
CEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHCCEEEE
AFDGSYTGESSGLPRNVPSPEINTEDFSAAVDFLGSLENVDREKIGILGICGWGGFALNA
EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCEEEEE
AISDTRVKAVAVSTMYDMTRVNANGYEIKLDPKGQYDRVPAQTAEERYKMKEGLNNARWE
ECCCCEEEEEEHHHHHHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
AMKDGYATLLPANNLDPKKDIMAKTPKFFAECANFYRTERGFHPRSVNSNPEHSWTTTAF
HHHCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHEEH
LPFINMPILKYAAELKAPALVVHGEKAHSRYFGEDAFKALGSKNKELVIVEGASHTDLYD
HHHHCCHHHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCHHH
DVAGKIPYDKFEQFFKANLK
HHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1427017; 10984043 [H]