| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yacG [C]
Identifier: 126208351
GI number: 126208351
Start: 1016542
End: 1016730
Strand: Reverse
Name: yacG [C]
Synonym: APL_0875
Alternate gene names: 126208351
Gene position: 1016730-1016542 (Counterclockwise)
Preceding gene: 126208352
Following gene: 126208347
Centisome position: 44.7
GC content: 41.8
Gene sequence:
>189_bases ATGTCAGAAACTATCGTAAATTGTCCGACTTGCAATCAAGACGTGATTTGGAAGCCGGAAAGTAAATATCGTCCGTTTTG TAGCGAACGTTGCCAATTGATCGATTTGGGGGAATGGGCAAATGAAGAAAAGCGTATTGCGGCAGTTGAGAATGATGTGA TGACTTCGGATTTAGAAGGGCATTACTAA
Upstream 100 bases:
>100_bases AAAATAATTTACCGTTGGAACAGGGGCTTGAGCGTATAAAAAAACAAGTCTTCGCCTTACACCAACAGTATTTAGATTTA GCAAAAGATAAGGAAAGCAA
Downstream 100 bases:
>100_bases CCAATAACTATGACGGAAGCTATTGCAAATTTATCATAAAATTTAACCGCTTGTAACAGCTTCCGTTTTTATTTCTCTAT TCAAAATAGGCGGAAAAGCG
Product: putative zinc-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSETIVNCPTCNQDVIWKPESKYRPFCSERCQLIDLGEWANEEKRIAAVENDVMTSDLEGHY
Sequences:
>Translated_62_residues MSETIVNCPTCNQDVIWKPESKYRPFCSERCQLIDLGEWANEEKRIAAVENDVMTSDLEGHY >Mature_61_residues SETIVNCPTCNQDVIWKPESKYRPFCSERCQLIDLGEWANEEKRIAAVENDVMTSDLEGHY
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family
Homologues:
Organism=Escherichia coli, GI1786290, Length=58, Percent_Identity=65.5172413793103, Blast_Score=75, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y875_ACTP2 (A3N0N5)
Other databases:
- EMBL: CP000569 - RefSeq: YP_001053576.1 - ProteinModelPortal: A3N0N5 - SMR: A3N0N5 - STRING: A3N0N5 - GeneID: 4849655 - GenomeReviews: CP000569_GR - KEGG: apl:APL_0875 - eggNOG: COG3024 - HOGENOM: HBG552546 - OMA: AWANERY - PhylomeDB: A3N0N5 - ProtClustDB: CLSK918903 - BioCyc: APLE416269:APL_0875-MONOMER - HAMAP: MF_00649 - InterPro: IPR005584 - InterPro: IPR013088 - Gene3D: G3DSA:3.30.50.10
Pfam domain/function: PF03884 DUF329
EC number: NA
Molecular weight: Translated: 7194; Mature: 7063
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETIVNCPTCNQDVIWKPESKYRPFCSERCQLIDLGEWANEEKRIAAVENDVMTSDLEG CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCC HY CC >Mature Secondary Structure SETIVNCPTCNQDVIWKPESKYRPFCSERCQLIDLGEWANEEKRIAAVENDVMTSDLEG CCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCC HY CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA