| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is mod [H]
Identifier: 126208289
GI number: 126208289
Start: 938618
End: 940465
Strand: Reverse
Name: mod [H]
Synonym: APL_0813
Alternate gene names: 126208289
Gene position: 940465-938618 (Counterclockwise)
Preceding gene: 126208292
Following gene: 126208288
Centisome position: 41.35
GC content: 36.15
Gene sequence:
>1848_bases TTGCCTGAAATTTTTAGCGAGGGCAAAATTGATTTTGATAAGTTCCAACAACTTTTCTCTGACAACATTTCTACTGAGCC TGACCGCTATCATCTCAACTGGGCAGGCAAATCGCAGGCGTATCAGCAATTACAAATTCCTACGCAAAAAACGCTTACAC CTTGTGTAGAAGAGAGCGTAGATTTCGAGCAAACGCAAAATATCTTTATTGAGGGAGAAAATCTTGAAGTATTGAAAGCG TTGCAAAAATCCTATTTCAATTCGATCAAAATGATCTACATTGACCCACCTTATAACACGGGAAATGACTTCGTTTATAA CGACAATTTCGCCCAAAACCAAACAGATTATCAGGCTCAAACTGGCGAAATAGGCGAAGATGGCTTTCTCAAAAAAGCCT TCCGCAAAAATGCCAAAGAGAATGGGCATTTCCATAGCAACTGGCTAAATATGATGCTCCCTCGTTTACACCTTGCCCGT AATTTGCTCAAAGATGACGGTGTGATTTTTATCTCCATTGATGATAACGAACAAGCACAGCTGAAATTATTGTGCGATGA AGTGTTTGGGGAGGAAAATTTTGTGGCAGAACTTATTTGGGATAAGCAGCATTCTCAACAGCAAGGGCTATTCAAGACAT ATCATGAATACGTTTTACTTTATGCTAAGAATATAAATAATCATAAGAATATTAAAGGTGGGACAGGTGTTATTGATGCT GGAGCAATAAAGAAAATCTCTAAATCTAATCCTGAAAGTGAATTTACATTTCCTGCTGGAGTAAAATTTGAAGCAAAAGA TGGTGTAGAACTAAAAGGAACTTTTGGAGATAGTGAAAAAGTTACTGTTGTTAAAGGATGCTTTAGGGCAATAAATGGCA GAACCCTAGAAGAAGTTACATTATCTGCAGGTTGGACACAGAAGAAACAAATGACAGAGTTTTTTGCAGGAAATGAAGTT TATGACACTAAAGGTCAAAAGGTTATTGAGTTCTATTTTTCATCAACAGGAAAGTTGAAATGTAGAAAAGAGAGAACATC AATAACTCCTCCTACCTTATTACCTAAATATGGTATGAGCAGTTTACATACAGACAATTTAAAAGAGTTGATGAATGCAA CAGCATTTAATAATCCTAAACCATTACCAATGTTAAGTGATTTTATTCGTTGGTTTACGGGGAGGGCGGATATTATCTTG GATTTTTTTAGTGGGAGTGGTTCCACTGCTCATGCGATATTAGAGACTAATTTAGCAGAAGGTAAAAAGAATACATTTAT AAGTGTTCAATTAGCTGAATCATTAAATGTAGATAATGAAGATCAAAAAGAAGCCGTTGAATTTTGTTTAAATTTAGGGG TTCCTGCAACTATTGCCGAAATTACCAAAGAACGTATTCGCCGAGCGGGCTCGCAAATTTTGCAAAAAAATGAGGAAAAT CGACCGCTTGATGTAGGATTTAAGGTGTTTAAATTAACCGACAGTCATTTTAAACAGTGGCAATCGCCCACAGTAGAAAG CCTTGCGGAACAATTAGAAATGTTTATCGATAACGTTAAAGAAAATACCGAACTGCAAGCAATGCTGTATGAAATTCTGT TACGTTTGGGACTGAAACTAACCTGTAATGTGCGTTATGAAAACAATATATTTTGGATTGAAGATGAAAAATCACAGCAC TATGCCATTTTATTGGAGCATATCGATGAGAATTTGCTTAATAGTGTTATCAATGTACAACCTCAAAAAGTGGTGGCATT AGATCGTTTGTTTGCTGGCAATGACGCATTGAAAAAAAATGCCGAATTGCAGATGAAAGATGCGAATATTGCATTTTTTG TGATTTAA
Upstream 100 bases:
>100_bases AGCCCCTTGAATTTTTTCAAAGGGACATCATAATGCCTAACAGCACAGCCTTGCCAACTTTTCGCTTAAAGATCAACAAC TTTTTCAATTAAAAGCACTC
Downstream 100 bases:
>100_bases ATTAAAACCCCTCTTTAGCAAAGAGGGGGAAGGGGAGATTTGGCAGAAGTGATTTATGCTCATACGAAATGAGACATCGT TATTAAATCTCCCCAGCCCC
Product: type III restriction-modification system methyltransferase
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MPEIFSEGKIDFDKFQQLFSDNISTEPDRYHLNWAGKSQAYQQLQIPTQKTLTPCVEESVDFEQTQNIFIEGENLEVLKA LQKSYFNSIKMIYIDPPYNTGNDFVYNDNFAQNQTDYQAQTGEIGEDGFLKKAFRKNAKENGHFHSNWLNMMLPRLHLAR NLLKDDGVIFISIDDNEQAQLKLLCDEVFGEENFVAELIWDKQHSQQQGLFKTYHEYVLLYAKNINNHKNIKGGTGVIDA GAIKKISKSNPESEFTFPAGVKFEAKDGVELKGTFGDSEKVTVVKGCFRAINGRTLEEVTLSAGWTQKKQMTEFFAGNEV YDTKGQKVIEFYFSSTGKLKCRKERTSITPPTLLPKYGMSSLHTDNLKELMNATAFNNPKPLPMLSDFIRWFTGRADIIL DFFSGSGSTAHAILETNLAEGKKNTFISVQLAESLNVDNEDQKEAVEFCLNLGVPATIAEITKERIRRAGSQILQKNEEN RPLDVGFKVFKLTDSHFKQWQSPTVESLAEQLEMFIDNVKENTELQAMLYEILLRLGLKLTCNVRYENNIFWIEDEKSQH YAILLEHIDENLLNSVINVQPQKVVALDRLFAGNDALKKNAELQMKDANIAFFVI
Sequences:
>Translated_615_residues MPEIFSEGKIDFDKFQQLFSDNISTEPDRYHLNWAGKSQAYQQLQIPTQKTLTPCVEESVDFEQTQNIFIEGENLEVLKA LQKSYFNSIKMIYIDPPYNTGNDFVYNDNFAQNQTDYQAQTGEIGEDGFLKKAFRKNAKENGHFHSNWLNMMLPRLHLAR NLLKDDGVIFISIDDNEQAQLKLLCDEVFGEENFVAELIWDKQHSQQQGLFKTYHEYVLLYAKNINNHKNIKGGTGVIDA GAIKKISKSNPESEFTFPAGVKFEAKDGVELKGTFGDSEKVTVVKGCFRAINGRTLEEVTLSAGWTQKKQMTEFFAGNEV YDTKGQKVIEFYFSSTGKLKCRKERTSITPPTLLPKYGMSSLHTDNLKELMNATAFNNPKPLPMLSDFIRWFTGRADIIL DFFSGSGSTAHAILETNLAEGKKNTFISVQLAESLNVDNEDQKEAVEFCLNLGVPATIAEITKERIRRAGSQILQKNEEN RPLDVGFKVFKLTDSHFKQWQSPTVESLAEQLEMFIDNVKENTELQAMLYEILLRLGLKLTCNVRYENNIFWIEDEKSQH YAILLEHIDENLLNSVINVQPQKVVALDRLFAGNDALKKNAELQMKDANIAFFVI >Mature_614_residues PEIFSEGKIDFDKFQQLFSDNISTEPDRYHLNWAGKSQAYQQLQIPTQKTLTPCVEESVDFEQTQNIFIEGENLEVLKAL QKSYFNSIKMIYIDPPYNTGNDFVYNDNFAQNQTDYQAQTGEIGEDGFLKKAFRKNAKENGHFHSNWLNMMLPRLHLARN LLKDDGVIFISIDDNEQAQLKLLCDEVFGEENFVAELIWDKQHSQQQGLFKTYHEYVLLYAKNINNHKNIKGGTGVIDAG AIKKISKSNPESEFTFPAGVKFEAKDGVELKGTFGDSEKVTVVKGCFRAINGRTLEEVTLSAGWTQKKQMTEFFAGNEVY DTKGQKVIEFYFSSTGKLKCRKERTSITPPTLLPKYGMSSLHTDNLKELMNATAFNNPKPLPMLSDFIRWFTGRADIILD FFSGSGSTAHAILETNLAEGKKNTFISVQLAESLNVDNEDQKEAVEFCLNLGVPATIAEITKERIRRAGSQILQKNEENR PLDVGFKVFKLTDSHFKQWQSPTVESLAEQLEMFIDNVKENTELQAMLYEILLRLGLKLTCNVRYENNIFWIEDEKSQHY AILLEHIDENLLNSVINVQPQKVVALDRLFAGNDALKKNAELQMKDANIAFFVI
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 70123; Mature: 69992
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIFSEGKIDFDKFQQLFSDNISTEPDRYHLNWAGKSQAYQQLQIPTQKTLTPCVEESV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHCC DFEQTQNIFIEGENLEVLKALQKSYFNSIKMIYIDPPYNTGNDFVYNDNFAQNQTDYQAQ CHHHCCEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCC TGEIGEDGFLKKAFRKNAKENGHFHSNWLNMMLPRLHLARNLLKDDGVIFISIDDNEQAQ CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH LKLLCDEVFGEENFVAELIWDKQHSQQQGLFKTYHEYVLLYAKNINNHKNIKGGTGVIDA HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEECC GAIKKISKSNPESEFTFPAGVKFEAKDGVELKGTFGDSEKVTVVKGCFRAINGRTLEEVT HHHHHHHCCCCCCCEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHEE LSAGWTQKKQMTEFFAGNEVYDTKGQKVIEFYFSSTGKLKCRKERTSITPPTLLPKYGMS ECCCCCHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC SLHTDNLKELMNATAFNNPKPLPMLSDFIRWFTGRADIILDFFSGSGSTAHAILETNLAE CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECHHCC GKKNTFISVQLAESLNVDNEDQKEAVEFCLNLGVPATIAEITKERIRRAGSQILQKNEEN CCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC RPLDVGFKVFKLTDSHFKQWQSPTVESLAEQLEMFIDNVKENTELQAMLYEILLRLGLKL CCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE TCNVRYENNIFWIEDEKSQHYAILLEHIDENLLNSVINVQPQKVVALDRLFAGNDALKKN EEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCC AELQMKDANIAFFVI CCEEEECCCEEEEEC >Mature Secondary Structure PEIFSEGKIDFDKFQQLFSDNISTEPDRYHLNWAGKSQAYQQLQIPTQKTLTPCVEESV CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHCC DFEQTQNIFIEGENLEVLKALQKSYFNSIKMIYIDPPYNTGNDFVYNDNFAQNQTDYQAQ CHHHCCEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCC TGEIGEDGFLKKAFRKNAKENGHFHSNWLNMMLPRLHLARNLLKDDGVIFISIDDNEQAQ CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH LKLLCDEVFGEENFVAELIWDKQHSQQQGLFKTYHEYVLLYAKNINNHKNIKGGTGVIDA HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEECC GAIKKISKSNPESEFTFPAGVKFEAKDGVELKGTFGDSEKVTVVKGCFRAINGRTLEEVT HHHHHHHCCCCCCCEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHEE LSAGWTQKKQMTEFFAGNEVYDTKGQKVIEFYFSSTGKLKCRKERTSITPPTLLPKYGMS ECCCCCHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC SLHTDNLKELMNATAFNNPKPLPMLSDFIRWFTGRADIILDFFSGSGSTAHAILETNLAE CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECHHCC GKKNTFISVQLAESLNVDNEDQKEAVEFCLNLGVPATIAEITKERIRRAGSQILQKNEEN CCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC RPLDVGFKVFKLTDSHFKQWQSPTVESLAEQLEMFIDNVKENTELQAMLYEILLRLGLKL CCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE TCNVRYENNIFWIEDEKSQHYAILLEHIDENLLNSVINVQPQKVVALDRLFAGNDALKKN EEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCC AELQMKDANIAFFVI CCEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]