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The map label for this gene is ycbX [H]

Identifier: 126208281

GI number: 126208281

Start: 928140

End: 928928

Strand: Reverse

Name: ycbX [H]

Synonym: APL_0805

Alternate gene names: 126208281

Gene position: 928928-928140 (Counterclockwise)

Preceding gene: 126208284

Following gene: 126208280

Centisome position: 40.84

GC content: 40.81

Gene sequence:

>789_bases
ATGAAAGTGACACAACTCAATCTTTATCCGATTAAATCAACGGCAGCTTATCGTGTCGAACAAGCCTTTGTTGAGCTTAA
AGGACTGAACTTCGATCGGGAATTTATGATTACCGAAACAGACGGAAAGTTTATAACCGCCCGTAAAGATGCGGAATTAT
ACAATTTATCTGTGTTCCCGAACGCAACAGGTATTGTGATTTGTCATGCAAGCGGTCAAAAATGCGTGGTGCTTTACCAG
GATTTTCAGTACGTTCAGACGAGTGAAGTTTGGGGAACCCACTTTGATTCTTTAGTAGCAAAAACAGAAGTAAATCAATG
GTTAAGTGAAATTTTCGGGCGAGAAGTGCAATTACGTTGGCTAGGAGGCAAGAGCCAACGAGAAGTGGTGAACTTTAAGC
AACATCCGCTAAGTTTTGCCGATAGCAATCCGGTTTCATTAATGTCGGAAAAATCACTTGAGCAAGTTAAGCTCTGGTCA
CCGGTTGAGATTTCGATGGAGCGTTTTCGTCCGAATATTGTGATCGATGGAAATATTGCTTTTGAAGAAGAACAGTGGGA
ACAAGTACAAATCGGTGAGGTCTTATTCACCAAGTCTGCATTATGCACTCGTTGTGTAATGATTACTCGTGATTTAACCA
CACTTGAACTCGACCCGAACGTTGAGCCTTTTCGAACGCTTAAACAAATGCATACCAATGAAAAGGGTAAGCCGGTTTTT
GGTATTCATTTAGTGCCTCAAAATAGCGGTGTAATTCGCTTAGGCGATCAAGTTTTAATAAAATCTTAA

Upstream 100 bases:

>100_bases
TTACCTTCTTTATTTGCAAATTCCTTTTACTTTTTCACCGCTTTTGGGTATGGTGCGAACGTATTTAAGCAAGCGGTCAA
ATTTATAGGAATTTTTACTA

Downstream 100 bases:

>100_bases
TAATCATTCTATATTATTCGCGCAGCCGATTATCGGTATGCGCTTTATTTTAAATTTAAAAGGAGAAATTATGGAACAAC
GCCGTTCTGTGTTGTTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKVTQLNLYPIKSTAAYRVEQAFVELKGLNFDREFMITETDGKFITARKDAELYNLSVFPNATGIVICHASGQKCVVLYQ
DFQYVQTSEVWGTHFDSLVAKTEVNQWLSEIFGREVQLRWLGGKSQREVVNFKQHPLSFADSNPVSLMSEKSLEQVKLWS
PVEISMERFRPNIVIDGNIAFEEEQWEQVQIGEVLFTKSALCTRCVMITRDLTTLELDPNVEPFRTLKQMHTNEKGKPVF
GIHLVPQNSGVIRLGDQVLIKS

Sequences:

>Translated_262_residues
MKVTQLNLYPIKSTAAYRVEQAFVELKGLNFDREFMITETDGKFITARKDAELYNLSVFPNATGIVICHASGQKCVVLYQ
DFQYVQTSEVWGTHFDSLVAKTEVNQWLSEIFGREVQLRWLGGKSQREVVNFKQHPLSFADSNPVSLMSEKSLEQVKLWS
PVEISMERFRPNIVIDGNIAFEEEQWEQVQIGEVLFTKSALCTRCVMITRDLTTLELDPNVEPFRTLKQMHTNEKGKPVF
GIHLVPQNSGVIRLGDQVLIKS
>Mature_262_residues
MKVTQLNLYPIKSTAAYRVEQAFVELKGLNFDREFMITETDGKFITARKDAELYNLSVFPNATGIVICHASGQKCVVLYQ
DFQYVQTSEVWGTHFDSLVAKTEVNQWLSEIFGREVQLRWLGGKSQREVVNFKQHPLSFADSNPVSLMSEKSLEQVKLWS
PVEISMERFRPNIVIDGNIAFEEEQWEQVQIGEVLFTKSALCTRCVMITRDLTTLELDPNVEPFRTLKQMHTNEKGKPVF
GIHLVPQNSGVIRLGDQVLIKS

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI31542713, Length=280, Percent_Identity=27.5, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI224600454, Length=289, Percent_Identity=25.9515570934256, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI157388923, Length=271, Percent_Identity=28.0442804428044, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1787179, Length=258, Percent_Identity=39.922480620155, Blast_Score=201, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17561286, Length=294, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71990971, Length=292, Percent_Identity=26.3698630136986, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17647607, Length=258, Percent_Identity=30.2325581395349, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI45550400, Length=296, Percent_Identity=25, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 29963; Mature: 29963

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTQLNLYPIKSTAAYRVEQAFVELKGLNFDREFMITETDGKFITARKDAELYNLSVFP
CEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCEEEEEEECC
NATGIVICHASGQKCVVLYQDFQYVQTSEVWGTHFDSLVAKTEVNQWLSEIFGREVQLRW
CCCEEEEEECCCCEEEEEEECCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
LGGKSQREVVNFKQHPLSFADSNPVSLMSEKSLEQVKLWSPVEISMERFRPNIVIDGNIA
ECCCCCHHHHCHHCCCCCCCCCCCHHHHHHCCHHHEECCCCHHHHHHHCCCCEEEECCEE
FEEEQWEQVQIGEVLFTKSALCTRCVMITRDLTTLELDPNVEPFRTLKQMHTNEKGKPVF
ECCCCCCEEEHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHCCCCCCEEE
GIHLVPQNSGVIRLGDQVLIKS
EEEEEECCCCEEEECCEEEECC
>Mature Secondary Structure
MKVTQLNLYPIKSTAAYRVEQAFVELKGLNFDREFMITETDGKFITARKDAELYNLSVFP
CEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCEEEEEEECC
NATGIVICHASGQKCVVLYQDFQYVQTSEVWGTHFDSLVAKTEVNQWLSEIFGREVQLRW
CCCEEEEEECCCCEEEEEEECCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
LGGKSQREVVNFKQHPLSFADSNPVSLMSEKSLEQVKLWSPVEISMERFRPNIVIDGNIA
ECCCCCHHHHCHHCCCCCCCCCCCHHHHHHCCHHHEECCCCHHHHHHHCCCCEEEECCEE
FEEEQWEQVQIGEVLFTKSALCTRCVMITRDLTTLELDPNVEPFRTLKQMHTNEKGKPVF
ECCCCCCEEEHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHCCCCCCEEE
GIHLVPQNSGVIRLGDQVLIKS
EEEEEECCCCEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]