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The map label for this gene is yclN [H]

Identifier: 126208195

GI number: 126208195

Start: 825251

End: 826198

Strand: Direct

Name: yclN [H]

Synonym: APL_0715

Alternate gene names: 126208195

Gene position: 825251-826198 (Clockwise)

Preceding gene: 126208194

Following gene: 126208196

Centisome position: 36.28

GC content: 41.56

Gene sequence:

>948_bases
ATGCAAAAACTAACCGCTTTAAATTTTTTATTTCTGGTCTTACTTTTTCTATTGAGTATTTCAGTAGGGGTTGCCGATTT
CCAATGGAGAGATCTTTTCACTCATACCGAACAGCTTGAATTACTTTTTATCAGTCGATTACCCAGAACGCTTGCCGTTG
TACTTGTCGGTGCCACACTTGGTATTGCCGGAATGGTACTTCAAATCGTACTTAAAAATCGTTTTATTGAACCCAGTATG
ATTGGAGCCAGCCAAAGTGCGGCAATCGGTATCTTAATTGTCAGCTTAATGTTTCCTGCCACACCGCTTATTATGAAAAT
GTCCTTTGCAACGTTAAGCGCATTAATCGGTATGGGGATTTTTATGCTGCTGCTTCGTCGATTACCCCCTCATCAAAAGT
TGATGGTTCCGCTCATCGGAATCGTATTCGGTAATATTATTGAGGCCATTACTACTTTCGTCGCATACGAAACCGACTCT
TTACAATTATTATCCGTTTGGTTCTCAGGCGACTTTTCCGGTATCTTAGCAGGGCGTTACGAATTATTATGGCTAACAGC
CGGGCTAGCCGTCCTTGTATATATTATGGCGGAACAACTCAGCATTGCCGGATTAGGTCAAAATATCAGTACCAGTTTAG
GTATCAATTACCGCCAAATGACTTGGTTTGCGTTAATTGTGGTTGCAATGATTACCGCGGTGGTTGTAGTTACGGTCGGA
CAAATTCCGTTTATCGGATTAGTTGTACCTAATATCATTTCTCGTTTAGCCGGTGACCGTTTACGCCAGAATTTACCTTC
AGTAGCATTACTCGGCGCGAACTTAGTCTTACTTTGTGACATTATCGGACGTGTGGTCAATGCGCCTTATGAAGTACCTA
TCTCGACCATCTTCGGGATTTGCGGAACGATTGTTTTTCTCTATTTACTGTTTAGAGGGAAAAAATAA

Upstream 100 bases:

>100_bases
CATTTTCAAAATAACTTAAAAAGTTTAACCGTTAGATAGATAAATGGCACATATCTCAATATATGTGCCATCGTTGATTA
TTAATATCCCTATAAAAATA

Downstream 100 bases:

>100_bases
TGCGTACCTCTAATATATTGTTTTTTTTAACCGGAATCTTATTCGCCAGTAGCCTATTCTTTATGGCATATAACGCTAAC
GGCAACTGGGATTTTGTCTT

Product: ABC transport system permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MQKLTALNFLFLVLLFLLSISVGVADFQWRDLFTHTEQLELLFISRLPRTLAVVLVGATLGIAGMVLQIVLKNRFIEPSM
IGASQSAAIGILIVSLMFPATPLIMKMSFATLSALIGMGIFMLLLRRLPPHQKLMVPLIGIVFGNIIEAITTFVAYETDS
LQLLSVWFSGDFSGILAGRYELLWLTAGLAVLVYIMAEQLSIAGLGQNISTSLGINYRQMTWFALIVVAMITAVVVVTVG
QIPFIGLVVPNIISRLAGDRLRQNLPSVALLGANLVLLCDIIGRVVNAPYEVPISTIFGICGTIVFLYLLFRGKK

Sequences:

>Translated_315_residues
MQKLTALNFLFLVLLFLLSISVGVADFQWRDLFTHTEQLELLFISRLPRTLAVVLVGATLGIAGMVLQIVLKNRFIEPSM
IGASQSAAIGILIVSLMFPATPLIMKMSFATLSALIGMGIFMLLLRRLPPHQKLMVPLIGIVFGNIIEAITTFVAYETDS
LQLLSVWFSGDFSGILAGRYELLWLTAGLAVLVYIMAEQLSIAGLGQNISTSLGINYRQMTWFALIVVAMITAVVVVTVG
QIPFIGLVVPNIISRLAGDRLRQNLPSVALLGANLVLLCDIIGRVVNAPYEVPISTIFGICGTIVFLYLLFRGKK
>Mature_315_residues
MQKLTALNFLFLVLLFLLSISVGVADFQWRDLFTHTEQLELLFISRLPRTLAVVLVGATLGIAGMVLQIVLKNRFIEPSM
IGASQSAAIGILIVSLMFPATPLIMKMSFATLSALIGMGIFMLLLRRLPPHQKLMVPLIGIVFGNIIEAITTFVAYETDS
LQLLSVWFSGDFSGILAGRYELLWLTAGLAVLVYIMAEQLSIAGLGQNISTSLGINYRQMTWFALIVVAMITAVVVVTVG
QIPFIGLVVPNIISRLAGDRLRQNLPSVALLGANLVLLCDIIGRVVNAPYEVPISTIFGICGTIVFLYLLFRGKK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=310, Percent_Identity=28.3870967741935, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790741, Length=326, Percent_Identity=29.4478527607362, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1788004, Length=304, Percent_Identity=33.5526315789474, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786347, Length=319, Percent_Identity=25.0783699059561, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786805, Length=289, Percent_Identity=26.643598615917, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34355; Mature: 34355

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLTALNFLFLVLLFLLSISVGVADFQWRDLFTHTEQLELLFISRLPRTLAVVLVGATL
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
GIAGMVLQIVLKNRFIEPSMIGASQSAAIGILIVSLMFPATPLIMKMSFATLSALIGMGI
HHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FMLLLRRLPPHQKLMVPLIGIVFGNIIEAITTFVAYETDSLQLLSVWFSGDFSGILAGRY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHH
ELLWLTAGLAVLVYIMAEQLSIAGLGQNISTSLGINYRQMTWFALIVVAMITAVVVVTVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
QIPFIGLVVPNIISRLAGDRLRQNLPSVALLGANLVLLCDIIGRVVNAPYEVPISTIFGI
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
CGTIVFLYLLFRGKK
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKLTALNFLFLVLLFLLSISVGVADFQWRDLFTHTEQLELLFISRLPRTLAVVLVGATL
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
GIAGMVLQIVLKNRFIEPSMIGASQSAAIGILIVSLMFPATPLIMKMSFATLSALIGMGI
HHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FMLLLRRLPPHQKLMVPLIGIVFGNIIEAITTFVAYETDSLQLLSVWFSGDFSGILAGRY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHH
ELLWLTAGLAVLVYIMAEQLSIAGLGQNISTSLGINYRQMTWFALIVVAMITAVVVVTVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
QIPFIGLVVPNIISRLAGDRLRQNLPSVALLGANLVLLCDIIGRVVNAPYEVPISTIFGI
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
CGTIVFLYLLFRGKK
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]