| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yeeX [C]
Identifier: 126208189
GI number: 126208189
Start: 819579
End: 819914
Strand: Direct
Name: yeeX [C]
Synonym: APL_0709
Alternate gene names: 126208189
Gene position: 819579-819914 (Clockwise)
Preceding gene: 126208177
Following gene: 126208190
Centisome position: 36.03
GC content: 37.8
Gene sequence:
>336_bases ATGGCTGATGTTAAAAAACAATCTTTCCAAGATATGTTGGATTATGTTCATCTATACCGTTTAAAAAACAAACTCCATCG TGAAACGGCGGACAATGATCGCAAAATTCGCGATAACCAAAAACGCGTATTACTTTTAGATAACTTGAATCAATATATTA ACGATTCGATGACGGTGGAAGACATTCGTGCCATTATTGCGAATATGCGTGACGATTATGAAAATCGTGTGGACGACTAT ATGATTCGCAATGCCGAACTTTCAAAACAACGCCGTGAAATTCGCCAAAAAATGGCGGCGCATAAAACGAGCGCATCCGA AAAAAGTGAAAAATAA
Upstream 100 bases:
>100_bases TGAACAAATAAATAAAGTGGAATAAAACATTTTGACGAATCAAATTAAAAAGTCTAGGATTCGATTAGTTTTAATATTTA CTAACCAAGAGGATCTTCAA
Downstream 100 bases:
>100_bases TTAATCTCCCTTATCGAGGTCGGAAACATTTAATTTTTTATAAAACCGAATTAAAGATCCGACCTCTTTTATTTTCAAGC CTAATTCTTCTCAAATTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MADVKKQSFQDMLDYVHLYRLKNKLHRETADNDRKIRDNQKRVLLLDNLNQYINDSMTVEDIRAIIANMRDDYENRVDDY MIRNAELSKQRREIRQKMAAHKTSASEKSEK
Sequences:
>Translated_111_residues MADVKKQSFQDMLDYVHLYRLKNKLHRETADNDRKIRDNQKRVLLLDNLNQYINDSMTVEDIRAIIANMRDDYENRVDDY MIRNAELSKQRREIRQKMAAHKTSASEKSEK >Mature_110_residues ADVKKQSFQDMLDYVHLYRLKNKLHRETADNDRKIRDNQKRVLLLDNLNQYINDSMTVEDIRAIIANMRDDYENRVDDYM IRNAELSKQRREIRQKMAAHKTSASEKSEK
Specific function: Unknown
COG id: COG2926
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0265 family
Homologues:
Organism=Escherichia coli, GI145693155, Length=95, Percent_Identity=64.2105263157895, Blast_Score=128, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y708_ACTPJ (B0BNZ0)
Other databases:
- EMBL: CP000687 - RefSeq: YP_001651719.1 - GeneID: 5852684 - GenomeReviews: CP000687_GR - KEGG: apj:APJL_0708 - HOGENOM: HBG296852 - OMA: YEDRVDE - ProtClustDB: PRK05423 - BioCyc: APLE434271:APJL_0708-MONOMER - HAMAP: MF_00683 - InterPro: IPR007458 - PIRSF: PIRSF028773 - ProDom: PD030876
Pfam domain/function: PF04363 DUF496
EC number: NA
Molecular weight: Translated: 13360; Mature: 13229
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVKKQSFQDMLDYVHLYRLKNKLHRETADNDRKIRDNQKRVLLLDNLNQYINDSMTVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCHH DIRAIIANMRDDYENRVDDYMIRNAELSKQRREIRQKMAAHKTSASEKSEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ADVKKQSFQDMLDYVHLYRLKNKLHRETADNDRKIRDNQKRVLLLDNLNQYINDSMTVE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCHH DIRAIIANMRDDYENRVDDYMIRNAELSKQRREIRQKMAAHKTSASEKSEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA