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The map label for this gene is rimP

Identifier: 126208119

GI number: 126208119

Start: 728268

End: 728729

Strand: Direct

Name: rimP

Synonym: APL_0637

Alternate gene names: 126208119

Gene position: 728268-728729 (Clockwise)

Preceding gene: 126208118

Following gene: 126208120

Centisome position: 32.02

GC content: 40.26

Gene sequence:

>462_bases
TTGGCAACTTTAGAACAAAAATTAGAAGAACTCGTTTCCGATACCATTGAATCAATGGGCTTCGAATTAGTCGGTATCGA
GTGTCAGCGAGCAGGGCGTTTTTTAACCGTACGCTTATATATTGATAAAGAAGGCGGTGTAACGATTGATGATTGTAGTG
ATGTGAGCCGTCAAGTGAGTGCGATTCTTGATGTTGAAGATCCGATTGCGGATAAATACAACTTAGAGGTTTCATCACCG
GGTTTAGATCGCCCGCTCTTTACCCTTGCTCATTACCAACGTTTTATCGGGCAAGAGATTGTAATTCATTTACGTATTCC
GATGTTCGATCGCCGTAAATGGCAAGGTAAATTAGAGAGTGTGGAAGGCGATTTAATTACGCTTACGGTGGATAACGAAA
CTCGTCAATTCGCATTCGGTAATATTCAAAAAGCAAATTTAGTTCCGGTTTTTAATTTTTAG

Upstream 100 bases:

>100_bases
CGGTTTTCCGTCTGGGGTTTTTTTGTGGCTGGTACATAATAATCGTATCAAAAGAGCTGGTTAAGGCTCTTTTTTTATAT
CTGTCATTTAGGAGGCTTCC

Downstream 100 bases:

>100_bases
AAGGTTAATCCCAAAAATGAGTAAAGAGATTTTATTAGCCGCAGAAGCGGTATCTAACGAGAAGTTATTGCCAAAAGAAG
CTATCTTTGAAGCGCTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MATLEQKLEELVSDTIESMGFELVGIECQRAGRFLTVRLYIDKEGGVTIDDCSDVSRQVSAILDVEDPIADKYNLEVSSP
GLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLESVEGDLITLTVDNETRQFAFGNIQKANLVPVFNF

Sequences:

>Translated_153_residues
MATLEQKLEELVSDTIESMGFELVGIECQRAGRFLTVRLYIDKEGGVTIDDCSDVSRQVSAILDVEDPIADKYNLEVSSP
GLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLESVEGDLITLTVDNETRQFAFGNIQKANLVPVFNF
>Mature_152_residues
ATLEQKLEELVSDTIESMGFELVGIECQRAGRFLTVRLYIDKEGGVTIDDCSDVSRQVSAILDVEDPIADKYNLEVSSPG
LDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLESVEGDLITLTVDNETRQFAFGNIQKANLVPVFNF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=60.9271523178808, Blast_Score=197, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_ACTP2 (A3N003)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001053344.1
- ProteinModelPortal:   A3N003
- SMR:   A3N003
- STRING:   A3N003
- GeneID:   4850438
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_0637
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- PhylomeDB:   A3N003
- ProtClustDB:   PRK00092
- BioCyc:   APLE416269:APL_0637-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17395; Mature: 17264

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLEQKLEELVSDTIESMGFELVGIECQRAGRFLTVRLYIDKEGGVTIDDCSDVSRQVS
CCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEEECCCCEEECCHHHHHHHHH
AILDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLES
HHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCC
VEGDLITLTVDNETRQFAFGNIQKANLVPVFNF
CCCCEEEEEECCCCCEEECCCCCCCCEEEEECC
>Mature Secondary Structure 
ATLEQKLEELVSDTIESMGFELVGIECQRAGRFLTVRLYIDKEGGVTIDDCSDVSRQVS
CCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEEECCCCEEECCHHHHHHHHH
AILDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLES
HHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCC
VEGDLITLTVDNETRQFAFGNIQKANLVPVFNF
CCCCEEEEEECCCCCEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA