| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is mukE [H]
Identifier: 126208062
GI number: 126208062
Start: 656751
End: 657464
Strand: Direct
Name: mukE [H]
Synonym: APL_0580
Alternate gene names: 126208062
Gene position: 656751-657464 (Clockwise)
Preceding gene: 126208061
Following gene: 126208063
Centisome position: 28.87
GC content: 45.94
Gene sequence:
>714_bases ATGACAGAGCAAATTCAAGACGTTATTTCTCCAAAATTGACAGTGGCAATTGCTAACCCGATTTTCCCAGAGCTAGACAG CCAACTTCGTGCCGGTCGCCATATTAATACGGAACAGCTGGACGAACACGCATTCTTAATGGACTTCCAAGCCGAGTTAG AAAGCTTTTACCGCCGTTATCACGTGGAATTAATTCGTGCGCCGGAAGGCTTTTTCTACTTACGTCCGAAAGCATCAACT TTGATCGCCCGTTCGGCAATGTCGGAAATGGAAATGTTAGTGGGTAAAGTGCTTTGCTATCTTTACCTCAGTCCGGAGCG TTTAGCGCAACAAGGCATTTTCAGCCAAGATGATGTATATGAAGAGCTGATGAATCTTGCCGATGAAAGCAAATTACTTA AGGCTGTGAACCCACGTTCGACCGGTTCTGACTTAGATAAAGCAAAATTAGCCGAGAAAGTCGGAGGTGCGTTACGCCGT TTAGCACGTATCGGTATCATTACCCGTATTGGTGATCAAAACAGCAAGAAATTTGTCATCTCGGAATCCGTGTTCCGCTT CGGAGCGGATGTCCGAGTAGGCGATGATCCGCGAGAAGCGCAATTACGCTTAATTCGTGACGGTGAAGCGACAACACCGG CAATTTTGGCGGAACAAGCGGTCGAATTTGCAGAAAATTCTGCAACTGACGAACTAGAAGATGAAACAGAATAA
Upstream 100 bases:
>100_bases ATCGACCAATATAACAAATAGTAGGGTGGGGAAAGTCCCACCATTGGAAAAACAGAAAGTTTAATGGTAGGCAGGAATGC CTGCCCTACGAGAGTAAAAT
Downstream 100 bases:
>100_bases CGGCTAACGAGATAAAGCAAATGACAGATACAAACGAATTATTTGAAGATCAAACCACTGCGTTGCAAAATTCTGCACCA ATCGCACCGCTTGCCAATCC
Product: condesin subunit E
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTEQIQDVISPKLTVAIANPIFPELDSQLRAGRHINTEQLDEHAFLMDFQAELESFYRRYHVELIRAPEGFFYLRPKAST LIARSAMSEMEMLVGKVLCYLYLSPERLAQQGIFSQDDVYEELMNLADESKLLKAVNPRSTGSDLDKAKLAEKVGGALRR LARIGIITRIGDQNSKKFVISESVFRFGADVRVGDDPREAQLRLIRDGEATTPAILAEQAVEFAENSATDELEDETE
Sequences:
>Translated_237_residues MTEQIQDVISPKLTVAIANPIFPELDSQLRAGRHINTEQLDEHAFLMDFQAELESFYRRYHVELIRAPEGFFYLRPKAST LIARSAMSEMEMLVGKVLCYLYLSPERLAQQGIFSQDDVYEELMNLADESKLLKAVNPRSTGSDLDKAKLAEKVGGALRR LARIGIITRIGDQNSKKFVISESVFRFGADVRVGDDPREAQLRLIRDGEATTPAILAEQAVEFAENSATDELEDETE >Mature_236_residues TEQIQDVISPKLTVAIANPIFPELDSQLRAGRHINTEQLDEHAFLMDFQAELESFYRRYHVELIRAPEGFFYLRPKASTL IARSAMSEMEMLVGKVLCYLYLSPERLAQQGIFSQDDVYEELMNLADESKLLKAVNPRSTGSDLDKAKLAEKVGGALRRL ARIGIITRIGDQNSKKFVISESVFRFGADVRVGDDPREAQLRLIRDGEATTPAILAEQAVEFAENSATDELEDETE
Specific function: Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interactio
COG id: COG3095
COG function: function code D; Uncharacterized protein involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Restricted to the nucleoid region (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mukE family [H]
Homologues:
Organism=Escherichia coli, GI226510932, Length=209, Percent_Identity=66.5071770334928, Blast_Score=292, Evalue=1e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007385 [H]
Pfam domain/function: PF04288 MukE [H]
EC number: NA
Molecular weight: Translated: 26685; Mature: 26553
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQIQDVISPKLTVAIANPIFPELDSQLRAGRHINTEQLDEHAFLMDFQAELESFYRRY CCHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HVELIRAPEGFFYLRPKASTLIARSAMSEMEMLVGKVLCYLYLSPERLAQQGIFSQDDVY HHHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHH EELMNLADESKLLKAVNPRSTGSDLDKAKLAEKVGGALRRLARIGIITRIGDQNSKKFVI HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE SESVFRFGADVRVGDDPREAQLRLIRDGEATTPAILAEQAVEFAENSATDELEDETE HHHHHHHCCCCEECCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TEQIQDVISPKLTVAIANPIFPELDSQLRAGRHINTEQLDEHAFLMDFQAELESFYRRY CHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HVELIRAPEGFFYLRPKASTLIARSAMSEMEMLVGKVLCYLYLSPERLAQQGIFSQDDVY HHHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHH EELMNLADESKLLKAVNPRSTGSDLDKAKLAEKVGGALRRLARIGIITRIGDQNSKKFVI HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE SESVFRFGADVRVGDDPREAQLRLIRDGEATTPAILAEQAVEFAENSATDELEDETE HHHHHHHCCCCEECCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA